KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386684
Entry
139386684         CDS       T10872                                 
Name
(RefSeq) cullin-3-like
  KO
K03869  cullin 3
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04120  Ubiquitin mediated proteolysis
ocla04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    139386684
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    139386684
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocla04121]
    139386684
   03400 DNA repair and recombination proteins [BR:ocla03400]
    139386684
Ubiquitin system [BR:ocla04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     139386684
DNA repair and recombination proteins [BR:ocla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     139386684
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DUF6655 Stu2_CTS
Other DBs
NCBI-GeneID: 139386684
NCBI-ProteinID: XP_070988590
LinkDB
Position
28:38921271..38944812
AA seq 766 aa
MSNLKGGVKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNAY
TMVLHKHGEKLYTGLREVVTEHLVNKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDI
LMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGA
IRNACQMLMILGLEGRSVYEEDFESPFLEMSAEFFQMESQKFLAENSASVYIKKVEARIN
EEIERVLHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLGCMYKL
FSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKTRFDRFLLESFNN
DRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRFM
QEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNT
TMDEFRQHLQSTGLSLGGVDLTVRVLTTGYWPTQSATPKCTIPPSPRHAFEVFRRFYLAK
HSGRQLTLQHHMGSADLNATFHGPIKKEDGSEVGVGGAQVTGSNTRKHILQVSTFQMTIL
ILFNNREKSTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENGHVFTVN
DQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKRMQHNVL
VAEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgtccaacctcaaaggcggcgtcaagaaggacaccaagatgaggataagagcctttcct
atgacaatggatgagaagtatgtcaacaatatctgggaccttctgaagaacgctatccag
gagatccagaggaagaacaacagcgggctgagcttcgaggagctctacaggaacgcctac
acaatggtgctgcacaaacacggcgagaagctctacacgggcctgcgtgaggtcgtcacc
gagcacctcgtcaacaaagtacgggaagatgtcctaaactcgttaaacaataactttctg
cagactttgaatcaagcgtggaacgaccaccagacagccatggtcatgatcagagacatc
ctgatgtacatggaccgggtgtacgtgcagcagaacaacgtggagaacgtctacaacctg
ggcctgatcatcttcagagaccaggtggtgcgctacggctgcatccgagaccacctgcga
cagaccctgctggacatgatcgcacgggagaggaaaggagaggtggtggacaggggagcg
atcaggaacgcctgtcagatgctgatgattctgggtctggagggtaggtctgtgtacgag
gaagactttgagtcccccttcttagaaatgtctgcagaattcttccagatggagagccag
aagttcctagcggagaacagtgccagtgtgtacatcaagaaggtggaggccaggatcaac
gaggagatagagcgggtgctgcactgcctggacaagtccacagaggagcccatcgtcaag
gtggtggaacgggagctcatctccaaacacatgaagaccatcgtggagatggagaattcc
ggcctggttcacatgctcaagaacggaaagacagaagacctgggctgtatgtacaagctg
ttcagccgtgtgcctaacggcctgaagaccatgtgtgagtgtatgagctcctacctgagg
gagcagggcaaggctctggtgtcagaggagggagagggcaagaaccctgtcgactacatc
cagggcctgttggacctgaagacgcggttcgaccgtttcctcttggagtcgttcaacaac
gaccggctcttcaagcagaccatcgccggagactttgagtacttcctcaacctcaactcc
cgctccccagagtacctctccctcttcatcgacgacaagctcaagaagggagtcaaaggg
ctgacagaacaggaggtggagtccatcctggacaaggccatggttcttttccggttcatg
caggagaaggatgtgtttgagaggtactacaaacagcacttggcccggaggctgctcacc
aacaagagtgtctctgacgactctgaaaagaacatgatctctaagctaaagactgagtgt
ggctgtcagttcacctctaaactggaagggatgttcagagacatgagcatctccaacacc
accatggacgagttcagacaacacctacagtccacggggctgtctctagggggcgtcgac
ctcacagtaagagtactcaccactggctattggcccacacagtcggccacgcccaaatgc
accatccccccctccccaagacacgccttcgaggtcttcagaaggttctacttggccaaa
cacagtggcagacagttgaccctccagcaccacatgggctcagccgacctcaacgctacc
ttccacggccccatcaagaaggaggatggttcggaggtgggagtgggaggagcccaggtg
acgggctctaacaccaggaagcacatactgcaggtttccaccttccagatgaccatcctc
atactcttcaacaacagagaaaagtccacgtttgaggagatccagcaggagacggatata
ccggagagggagctggtgcgagcgctgcagtcgctggcctgcgggaagcccacccagcgc
gtcctcaccaaggagcccaagtccaaggagatcgagaacggccacgtgtttacagtcaac
gatcagtttacctccaagctgcacagagtcaaaatacagacggtcgctgctaagcagggc
gagtcggacccagagaggaaggagacgcggcagaaggtggatgacgacaggaagcatgag
atcgaggcggccatcgtccgcatcatgaagtccagaaagaggatgcagcacaacgtcctg
gtagcagaggtcacccagcagctgagggcccggttcctccccagccccgtggtcattaag
aagcgcattgaaggactcatagagagagaatatttggcacggacgcctgaggaccgcaaa
gtctacacctacgttgcataa

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