Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386705
Help
Entry
139386705 CDS
T10872
Name
(RefSeq) nuclear receptor ROR-beta-like isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139386705
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ocla03310
]
139386705
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
139386705
Nuclear receptors [BR:
ocla03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
139386705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
139386705
NCBI-ProteinID:
XP_070988634
LinkDB
All DBs
Position
28:35750288..35774115
Genome browser
AA seq
507 aa
AA seq
DB search
MRDTRPAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDR
TNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYSEVQKHQKNQELMNQEVVNQGC
LKQGLSLTREDVAGGDSEGDRHRELSHSCSSGGSSSTLSDLDDIPDLFDLPLTPEEAHEY
CSLELLGGHDGSTGNTSNSSSSSSSSNNSSNQNSPQQNLLDVTDANGIKHEYQMLSHTQA
ALLEPLANDCTLMDIERITQSVVKSHLETSQYSSDDLKRLTYSGIQYSPEETRNFQCKSE
EFMWQQCAHHITNAIQYVVEFAKRITGFMDLCQNDQIILLKAGCLEVLLIRMCRAFNANT
NTMFFDGKFASAQLFKALGCDDLVSAVFDLAKGLCRLQLTDEEMALFSAAVLLSPERPWL
TDSQKVRKLQEKLFLALQHSLHMSGASDEKLDQMVSKLLMMKSICNLHVNKLEFFRLVHP
ETAYSFPPLYREVFGSEISLPDSTNSS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagagacacacggccagctcaaatagaagtaataccctgcaagatctgtggggacaag
tcctcaggtatccactatggggtcattacctgcgaaggttgcaaggggttcttccgccgc
agccagcagaacaacgccatgtactcgtgttcccgccagagaaactgtcttattgaccga
accaaccgcaaccgctgccaacactgcagactgcagaagtgtctggctttgggcatgagc
cgggacgcggtgaagtttggccgtatgtctaagaagcagcgagacagcctgtactctgag
gttcagaagcaccagaagaaccaggagcttatgaaccaggaggttgtgaaccaggggtgt
ctgaaacagggtttgtccctgaccagggaagatgtggcagggggagacagcgagggggac
aggcacagggagctcagtcactcctgcagcagcggcggctccagctccaccctgagtgac
ctggatgacatccccgacctgtttgacctgcccttgaccccggaggaggcccacgagtac
tgcagcctggagctgctgggaggccacgacggaagcaccgggaacacctcaaactcttca
tcatcgtcatcatcctctaacaattcgtccaatcagaactcgccgcagcagaatctgctg
gatgtcacagacgccaatggaatcaaacatgagtaccagatgttgtcgcacacacaagcc
gcgctgctggagccactggccaatgactgcactctaatggatatagagcgtatcacccag
agtgtggtcaagtcccacttggagacgagtcagtacagttctgacgacctgaagcggctg
acatacagtgggattcagtactcacctgaggagacccgcaacttccagtgcaagtctgaa
gagtttatgtggcagcagtgtgcccaccacatcaccaatgccatccagtacgtggtggag
tttgccaaacgcatcactggcttcatggacctgtgtcagaacgaccagataattctgctc
aaagcaggctgtctggaggtgctgttgatcaggatgtgcagggcgtttaacgctaacacc
aacaccatgttctttgatggcaagtttgcctccgcccagctcttcaaagccctcggttgc
gatgacctggtcagtgccgtgtttgacttggctaaaggtctctgccgcctgcagctaacc
gatgaggaaatggctctgttcagcgccgctgtccttctgtcaccagagcgaccatggctg
accgacagccagaaggtccggaagctgcaggagaagctcttcttggctctgcaacacagt
ctgcacatgagcggggcctccgacgagaaactagaccagatggtgtccaagctgctgatg
atgaagtccatctgtaatctccacgtcaacaagctggagttcttccgtctggttcacccc
gagaccgcatacagcttcccaccactctatcgggaagtgttcgggagtgagatctctcta
cccgactctacaaacagctcctag
DBGET
integrated database retrieval system
