Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386747
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Entry
139386747 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: GREB1-like protein
KO
K27478
GREB1-like protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
139386747
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
cpSF2-GREB1
GREB1_2nd
GREB1_N
TAGT
GREB1_C
Pox_A3L
HopA1
Motif
Other DBs
NCBI-GeneID:
139386747
NCBI-ProteinID:
XP_070988667
LinkDB
All DBs
Position
28:30416295..30452554
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AA seq
1944 aa
AA seq
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MGNSYAGQPKSARFEEALHNSIKASLCSSSGDPQPVFTQLYLEPVHYPGNMKDIKPKVDL
YLPCGKPPGQDQLNGQASNGLEEMKVDGSSDTSSPPPPNLQGPSPDSCCTIGGFCQAGRD
LRLVSMLTEPIQVPAGFELVGAKSPSIPEHILVCAVDRRFLPDENGKNSLLGFSGNCVGC
GEKGFRYFTEFSNHINLKLATQPKKQKHLKYYLVKNCQDALCKGPLICWKDCKTCQLSIS
SSSTSKPNSSSSLSIKENGGTNRHSCSPFSLSDSPSTRIPSASSVFLSAQDLAREGSFLK
PLAFPPGTETLPIVLIVNSPASGLGAEGRPPLLSLSQVSLGTQGQGYRTSDPGNSPVLSA
MTLGPPKKRHRGWHPNPLVPVPPTAIPMPTIQPIVYSPGSVLAMPTPQPPVAGVLQPQPV
TAGETVIVPNNLLNTSGVRPVILIGHGTLPYFYGNVGDIVVSPLLVSCYKGNKLTEKTLS
SLGLNSSQLLSVETIILLTLQYLARLGSEQIPLRELLEQIVLKAMLICPGGLSISPAQLP
WLARLRASVTGGRVQVLVTQNSLGEGISESLRSLCNGPPHQQCLPTYVVIVFASKMSGNE
FCVLVLGKYQARALAEGMLTTNEFLKEISYELITGKVSVLESNFKTTSLGDNLDKQLLHI
QRQRKGQVIQPFQGDVTDHIPSQEAATMVPPSESELLSDMFQIHSPQLSVARSLLSLVCS
IADSGSQSLDLGRFCKVDFLVLVSPSHVLMNQTSHRIQQSGVLVDLGIEDASSAHQRSDQ
YVVRLDGDVHAKMEAFMRKVKQNPYTLFVLIHDNSHVDLTSARSGXVCHGELQGIADRVV
NCQEVLEALNLLVLQVSCFPFALQTRQSRISVHNEVHWPDNTDSLGEVSPKELVYFGLRD
NSSSLRWGVASPILRCDDAXKMVNMLLERHPHLHSMVIRSYLLIQQYTEAMMALISSPSL
RDNITPETLAMVEDLISAPGREGTRGRGHMLLIRVPSLQLAMLAQERLEDVRDKLGLQFC
FAILLGNPAAELSLPRHFANRLRAWQGCENEDWIPQTYEDLEGLPCVVILTGKDPLGETF
PRSLKYCDLRLIDSSYLTRTALEQEVGLACSYVSLGMVQEPRKAMAHRDPETDKTSVPQD
PGLELHVDLEKSQSNVSTATKASENGVSSSDIPDSSQKPSTSSCPPGGRAGSIIFFFFFF
FFXXWTIPGTASSSPCRVKQECDSLGNAAPCPSNTPPSCSSSSSTQCPSQSTGCGYGSKS
PLVSPRTVILSHAAYNLLAPESGSQLSSFSLLPHADVGWSSLLIPLVRPNLQGAEQSIFY
RQWTVAGEHHADHEAPPVPHPQRLLLSGPPQVGKTGAYLQFLRILFRMLIRLLEVDVYDE
EELEETTTDMSEATPPARTQWPDIEEIRKLPXRRASSVYTDKMPKGLKDPKLEGESQMPV
KRETVSIRLSMFAAHNAFHHCEQCHHYCEGSPATQLSECTFHAFTFCSSMLGEEVQLHFI
IPKAKEQHFVFSQHGSHLESMRLPLVSAQDPSLLKSPIFTPTTGRQEHSLFNIFHAMEGT
AHLHILVVKEYEMQHYRRKWPNHILLVLPAMLNSAGVGAARFMIKELSYHNLELERNRLG
EQGVKRQDIWPFIVMMNDSCVLWNAHQPQYSSSDMADTGPSLTNVSLKTVLQHIEATPKI
FLYTMCGTRKWSSALARRLPAMPFSRCHLHDFVMLNVDLTQNVQYDLNRYSCEEVDFNLR
ANSSGLLLCHFNHFSLMKKHIPFGGHKDFLVKPKLTVMENTAPISPYQYVCAPDSDHTLL
AAPAQFLLEKFLQSCSHRLFPTAVQNNSNPVLSIDSFFNIGPEVKSIDGFLNIGPEGIRI
LPYFDDWLIFSPSCEFVAENQALTLTHHKKLHTRPKVESVVKVPTFQQLMGTLTAASRVT
LLGLLSLRLLQVWFNDLRLDPKWY
NT seq
5835 nt
NT seq
+upstream
nt +downstream
nt
atggggaattcatatgcagggcagccgaagtctgctcgcttcgaagaggccctccacaac
tctatcaaggcctccctatgctccagcagtggagacccacagcccgtcttcactcagcta
tacctggagcctgtccattatcctggcaacatgaaggatataaagcccaaagtggacctg
tacctgccgtgcgggaagcctccgggtcaggatcagctgaacggccaggcctctaatggt
ctggaggagatgaaggtggacggcagctctgacaccagcagccccccaccgcccaaccta
caaggcccctcgcccgacagctgctgcaccattggcggtttctgtcaggccggtagggac
ctccgtctggtctccatgttgacagagccaatccaagtcccagctggctttgagttagtc
ggtgccaagtcccccagcatcccagagcacatcctggtgtgtgctgtggatcgacgcttt
ctgcctgatgagaacgggaaaaattcacttttagggttttcagggaactgtgttggctgt
ggagagaaagggttccgctactttactgagttctccaaccacatcaacctgaagctggcc
acgcagcccaagaagcagaagcacttaaaatactacctggtgaagaactgtcaggatgct
ctgtgcaaaggacccctcatctgctggaaagactgtaagacatgtcagctctccattagc
agttcatccacctccaagcccaactcctcatcctccctgagcatcaaggagaatggaggc
accaacagacacagctgttcccccttctccctgtcagactccccatctaccagaattccc
tctgcatcctctgtgttcctctcagcccaggacctggcccgagagggcagcttcctcaaa
cctttggcctttccccctgggacagagactctaccaatagttttgatagtgaacagtccg
gctagcggactgggtgcagagggccgcccccccttactgagcctctcccaggtgtctctg
ggaacccaaggacaggggtacagaacctcggacccaggaaacagccctgttttgtctgcc
atgacccttggcccgcccaagaagcgccaccgcggttggcaccccaaccccctggtccca
gtcccccctacagccatccctatgcccaccatccaacccatcgtctactccccaggctct
gtactggctatgcctactcctcagccgcctgtagcaggggtccttcagccccaacctgtc
actgccggagagactgtcattgtccccaacaacctcctcaacacctcaggagtccgtccc
gtcatcctcatcgggcatggtacgttaccatacttctacgggaacgtgggggacattgtg
gtgagccccctgctagtgagctgctataaaggcaacaagctgactgagaagaccctgtcc
agtcttggactgaacagtagccaactgctcagtgtggaaaccataatactcctcaccctg
cagtaccttgcaaggctaggttcggagcagatccctctgagggagttgttagagcagatt
gtgctgaaggccatgttgatttgtcctggaggtctctccatctccccggcccagctgccc
tggctagcccgcctgagggccagcgtaactgggggcagggttcaggtcctagtcacccaa
aactccctgggggagggcatctccgagtccctgcgctcactctgcaatgggccgccccac
caacagtgcctgcccacctacgtggttattgtttttgcctccaagatgagcggcaatgag
ttctgtgtgctcgttctggggaagtaccaggcgagagcactagctgagggaatgctcacc
accaatgagttcctgaaggagatcagctacgagctcataacaggaaaagtcagtgtccta
gagtctaacttcaaaaccacatcactaggggacaacctggacaagcagctgctacacatc
cagcggcaacggaagggccaggtcatccagcccttccagggcgatgtcaccgaccacatc
ccgtcccaggaggcagccaccatggtacctccctccgagtcagagctgctgagtgacatg
tttcagatccactctccccagctgagtgtagccaggagcctgctctccctggtgtgttcc
atagcagactcaggcagccagagtctggatctgggccgcttctgcaaggtggacttcctg
gttctggtttctccgtctcacgtcctgatgaaccagacctctcatcgcatccaacaatca
ggagtgctagtggacctgggtatagaggatgcttcctcagctcaccagaggtcagaccag
tacgtggtgcgtctagatggagacgtccacgccaagatggaggcctttatgaggaaagtc
aaacagaatccctacaccctgttcgtgctcatccacgacaactcccacgtggacctgacc
agtgcccggtccggcntcgtctgccacggggagcttcagggtatagctgacagggtggta
aactgccaggaggtcctggaggccttgaacctgctggtgctgcaggtcagctgcttcccc
ttcgccctgcagacaagacagtcccgcatcagcgttcacaacgaggtgcactggccagac
aacacagacagcctgggggaggtctctcctaaggagctggtgtactttggcctgagggac
aacagcagctctctgcggtggggggtggccagccccatcctgcgctgtgatgacgctnng
aagatggtcaacatgctgctggagagacatccccacctacacagcatggtgatcaggagc
tacctgttgatccagcagtacacagaagccatgatggctctgatctcctctccttcccta
cgggacaacatcactcccgagaccctggccatggtggaggatctgatcagtgctccgggc
cgggaggggaccaggggccggggccacatgctgctgatccgggtgccctctctgcagcta
gccatgctggcccaggagcgcctggaggacgtcagggacaagctgggtctccagttctgc
tttgccatactgctggggaaccctgccgccgagctcagccttccacggcacttcgctaac
cgactcagggcctggcagggatgtgaaaatgaggactggatccctcaaacctatgaggat
ctggagggtcttccctgtgtcgtcatcctcactggaaaagaccctctgggtgagaccttc
ccaaggtctctgaagtactgtgacctgcgtctgatcgactccagctacctgacacgtacg
gccctggagcaggaggtaggtctagcctgctcctacgtgtccctggggatggtgcaggag
ccccgcaaggcaatggcccacagggacccagagacagacaaaaccagcgtcccccaggac
ccaggcctagagcttcatgtggacctggagaagtcccagagcaatgtcagcactgctact
aaagcctccgagaacggggtcagctcttctgacatccctgactcctcccagaagccctcc
acctcctcctgcccccccggaggcagggccggcagcatcatttttttttttttttttttt
tttttttgatgatggactattccgggcacggcctcatcttccccctgccgggtcaaacag
gagtgtgactccctgggtaatgccgccccctgcccctccaacacccctccctcctgctct
tcttcctcctctacccaatgccccagccagtccacggggtgtggctatggcagcaagtca
cctctagtctctccgcggactgtcatcctgtcccacgcagcctacaacctcctggctcca
gaatcagggagccagctgagctccttctccctgctgcctcacgctgatgtgggctggagc
agcctgctgatccccctcgtcagacctaacctccagggggcagagcagagtatcttctac
agacagtggaccgtagccggggagcaccatgccgaccacgaagctcccccggtgccacac
ccacaacgcctgctgctcagtggacccccacaggtggggaagaccggtgcctacctgcag
tttctacgcatcctgttccgcatgttgattagactgctggaagtggatgtgtacgatgaa
gaagagctggaggaaacgaccacggacatgtctgaggccacacccccagccaggacccag
tggccagacatcgaggagatccgcaaactacccntcagaagggccagttccgtttacact
gacaagatgccaaagggcttgaaagatcccaaactggaaggagagagccaaatgcctgta
aagagggagactgtgtcgattcggctgagtatgttcgcggcccacaatgcatttcaccat
tgtgagcagtgtcaccattattgtgaaggaagccctgccacacagctgtcggagtgcacc
ttccacgccttcacattctgctcgtccatgctgggagaggaggtgcagctccacttcatc
atccccaaggccaaggagcagcactttgttttcagccagcacggcagtcacctggagagc
atgaggctgcccctcgtctctgcgcaggaccccagtctgttgaagagccccatcttcacc
ccgaccacggggcgtcaggagcacagccttttcaacattttccatgccatggagggcacc
gcccacctccacatcctggtggtcaaggaatacgagatgcaacactacaggagaaaatgg
cccaaccacatcctgctggtgctgccagccatgttgaacagcgccggagtcggggcagct
cggttcatgatcaaggagctgtcataccacaacctggagctggagaggaaccgtctggga
gagcagggggtcaagaggcaggacatctggcccttcatagtcatgatgaacgactcctgt
gtgctctggaacgcacaccaaccccagtacagcagcagtgatatggcagacacagggccc
agtctgaccaacgtgtctttgaagacggtgctgcagcacattgaggctactcctaagatc
ttcctgtataccatgtgtggcacccgcaagtggagcagtgccctggcccgccgcctgcct
gccatgcccttctcccgatgccacctccatgactttgtcatgctcaatgtggacctgaca
cagaacgtccagtacgacctcaacaggtacagctgtgaggaggtggacttcaacctgaga
gccaacagcagtggtctgctgctctgtcatttcaaccacttcagcctgatgaagaaacac
attccctttggaggacacaaggactttctggtcaaacccaaactcacagtgatggagaat
acagcccccatcagcccgtaccagtatgtctgtgccccagacagtgatcacaccctcctg
gctgccccggctcagttcctcctagagaagttcctccaaagctgcagccacagactgttc
cccacggcagtacagaacaacagcaaccctgtgctgtccatagacagtttcttcaacata
ggccctgaagtaaaatccatagacggtttcctcaacataggccctgaggggatcaggatc
cttccttactttgacgactggctcatcttctccccctcttgcgagtttgtggctgagaac
caagcgttgacactgacccaccacaaaaaacttcacaccaggccaaaagttgaatcagtg
gtgaaggtaccaacgttccaacaactgatgggcacactcacggcggcctccagggtgaca
cttttaggccttctgtctttaagactactacaagtgtggtttaatgacctccgcctggac
cccaagtggtactga
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