Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386833
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Entry
139386833 CDS
T10872
Name
(RefSeq) protein Jumonji-like
KO
K11478
protein Jumonji
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
139386833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139386833
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
139386833
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
139386833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
139386833
NCBI-ProteinID:
XP_070988784
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All DBs
Position
3:4527870..4584632
Genome browser
AA seq
1131 aa
AA seq
DB search
MAYFGSAQDDVDLEDEDDEEEECDDRMSAHSHNSTSCPSSQRKNKTTPGKKVSNGHVLNG
HSRSLRGKELFLRPRGREAIQARERAERGEARRENHRTSTGRPARTSSTTHSLRHSRPNK
EHPKQVSKVNRLSRVSSATVRNSCAKKPPASRPLLSRTVKSTATALPRGHVRYTKARLLK
EAKLTVGKRASSKARQPLKNQRRSACGSARRHPRPPHSNSGKLSSGDAKTPNKQKVQSNK
AAGRCCLQRVNGQLHPRRCGGKQVLQGREGVRHSKRRLGLPAEESPTETPESSPEVKKVR
LQINAPETRSSRKVNVQEKAVAGSGGHLGKVTSSRPSSSEQRPKRASAGKLMLTRQAQPI
PPTANTTTTANTTPPAKNTTSKKTFQGTSKNTSHVTSKGTSTSTSTSSAAKVKPGTSSPA
KPAAEPKAAERQRESGEKRGAAPPPPPPLTEVPVFRPSLEEFHDPLVYVEAVRGQAESYG
LCRVAPPQDWRPECKLKEDMRFVTQVQHIHKLGRRWGPNVLRLACIRKHLQAQGISMEDP
PLIGGCELDLARFFQLINDMGGMQQVSDMKKWNKLADQLRIPKTAQDRLAKLQEAYCQYL
LSYDSLDPAERIRLEREVLEEKGRLEKKRGPLEGHSDDSQQSLLQLPRCEPKNGLVNGVI
RRNGLPRNLEEGAKEGKKQEKDMWLRSSRRRLFSQEKKGGRGGAEEEKEFLSDQHKCIYR
GKSVSLTTFYRTARNTMNMCFNKEPGTAEVEQEYWNIVEQRECHVAVHCGKVDTKTHGSG
FPVGKSETFSKHGWNLTILPNNSGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRDHHRLP
YIDYLHTGADCIWYCIPAEEKVKLDKVVHTLLQANGTPGLEMLENNIMISPEVLCRAGVK
VHRTVQQSGQFVVCFPAAFVSKELKCRRIERSFSMEKLLYQIAMSESKRENGVILSTMTS
LLKDLRDTELRQRRDLFDAGLRSVARYCSHDNQASSESRRIQRQWLRLDPSDRRCQVCQH
LCYLSMVVQESENVVFCLECVLLYVQKHKSCRGLKMMYRYDEDQINHLVSRVCGRVLEKS
GAMKRRGTRGLQGPGEASTPAKRSARNRTSITVSLTRLPSSTLPKTALSSK
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactttgggagtgcccaggatgatgtggatctggaggatgaagatgatgaagag
gaggagtgtgacgacaggatgtcagctcacagccacaactcaacttcctgtccgtcctca
cagcggaaaaacaaaacaacgccggggaagaaggtctccaatggacatgtgttgaatggc
cacagcaggtccttacgggggaaggagctcttcctgaggcccagagggagagaggctatc
caggccagagagagggctgagcggggagaggcccggagggagaaccacaggacctctaca
ggacgcccagccaggacctccagcaccacccacagtcttcgccacagcaggcccaacaag
gagcacccaaagcaggtttcaaaagtgaacaggctgtcgcgggtatcgtcagctaccgta
cgcaactcctgtgccaaaaagccgccggcctcccgaccactgctgtccagaactgtgaag
tccacagccacagcgcttcccaggggccacgtccgctacaccaaagccagacttctcaaa
gaggccaaactcaccgtgggcaagagagcctcctccaaagctcgccaacccctgaagaac
caacggcgctctgcctgtggcagtgcccgccgccacccacgcccaccacactccaactca
ggaaaactctcaagtggcgatgcaaagactcccaacaaacagaaggtacaatccaacaag
gcagccggcaggtgttgcctacaacgagtcaacgggcagcttcacccacgccgatgtggc
ggtaagcaggtactgcaggggcgtgagggcgtcagacactccaagcgacgtctggggctc
ccggctgaggagagtccaacagagacaccggagtcttcgccggaggtcaagaaggttaga
ctgcagatcaatgccccggagacgcgaagcagcaggaaggtcaatgtccaggagaaggct
gtggcggggtccggcggccatcttggtaaggtcacgtcatcccgaccttcctcctcggag
caaagacccaaacgagcctccgctggcaagctgatgttgacccgacaagcacagcccata
ccccctactgctaatactactactactgctaatactacaccaccagctaagaacactact
tctaagaaaactttccagggcacttccaagaacacttcccatgtcacttccaagggcact
tccacctccacttccactagctcagcagccaaggtgaaaccaggcaccagcagcccagct
aaaccagcagcagagcctaaagcagcagagaggcagcgggagagtggggagaagagaggt
gcagcaccaccccctcccccgcccctaaccgaggtgccagtgttcagacccagtctggag
gagttccacgaccctctggtgtatgtggaagcggtgcgcgggcaggcagagagctatggg
ctgtgcagggtggctcctcctcaggactggaggccagagtgcaagctgaaagaggacatg
aggtttgtgacccaggtgcagcacatccataagttgggtcggcgctgggggcccaatgta
ctccggctggcctgcatcaggaaacacctccaggcccagggcatctccatggaggacccc
ccgctcataggcggatgtgagttggacctggcccggttctttcagctcatcaacgacatg
ggcggcatgcagcaggtcagcgacatgaagaaatggaataagctagccgaccagctccgt
atccccaagactgcacaggatcgtctggccaagctgcaggaggcctattgtcagtaccta
ctgtcctacgactccctggaccccgctgagcgcatccgcctggagagggaggtgctggag
gagaaggggaggctggagaagaagagagggcccctggagggccactcagatgactcccaa
cagagcctgctccagctgccccgctgtgagcccaagaatggcctggtaaacggggtgatc
cggaggaacggcctgcccaggaacctggaggaaggagcgaaagaggggaagaaacaggag
aaggacatgtggctgaggtccagcaggaggagactgttctctcaggagaagaaaggagga
agaggaggagcagaggaggagaaagagtttcttagcgaccagcacaagtgtatatacagg
gggaagtcggtttctctcactacgttctacaggacagccaggaatactatgaacatgtgt
ttcaataaggagcctgggacggctgaggtggagcaggagtactggaacatcgtggagcag
agggaatgtcatgttgccgtgcactgtgggaaagtggacactaaaactcatgggagtggc
ttcccagttggaaagtctgagacgttttcaaaacatggatggaaccttacaatccttccc
aataattcaggatccatcctacgccatcttggtgctgtgccaggagtcaccattccttgg
ctgaacatcggcatggtcttctctacctcatgctggtcgcgagaccatcaccgccttcca
tacattgactacttacacacgggtgctgactgcatttggtactgtattcctgctgaggag
aaggtgaagctggacaaggtggttcacacactactgcaggctaatggaaccccaggactg
gagatgttggagaacaacatcatgatctctccggaggtgctgtgtcgagcgggggtcaaa
gtgcaccggaccgtccagcagagtggccagttcgtcgtctgtttcccggcggcgttcgtc
tccaaggagctgaaatgtcgacgcatagagaggtccttctccatggagaagttgctgtac
cagatcgcaatgtcagaatccaaacgggagaatggtgtcattctgagtaccatgacctca
cttctcaaagacctcagggatacagagttgagacagcgcagggatctgtttgacgccggg
ctgcggtctgttgcccgctactgtagccatgacaaccaggcctcgtcagagagcaggagg
atccagcgccagtggctgaggctcgacccctcagaccgacgctgccaagtgtgccaacac
ctctgctacctctccatggtggttcaggagagtgagaacgtggtgttctgtctggagtgt
gtcctgctgtacgtacagaaacacaagtcctgccgaggcctcaaaatgatgtaccgttac
gacgaggaccaaatcaaccatctggtgagcagggtgtgtgggagagtgctggagaagagc
ggcgctatgaagaggagagggacgagaggacttcagggccccggtgaggcgtccaccccg
gccaaacgcagcgcccgaaacagaacctccatcactgtgtccctcacccgcctcccctcc
tccaccctgcccaagaccgccctcagctctaaataa
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