Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386837
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Entry
139386837 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139386837
04121 Ubiquitin system [BR:
ocla04121
]
139386837
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139386837
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
139386837
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139386837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
Zn_ribbon_19
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-RING_16
zf-Nse
HypA
zf-RING-like
zf-HC5HC2H
C1_2
Zn_ribbon_6
DZR
Motif
Other DBs
NCBI-GeneID:
139386837
NCBI-ProteinID:
XP_070988787
LinkDB
All DBs
Position
28:complement(36648328..36653317)
Genome browser
AA seq
311 aa
AA seq
DB search
MAEAPPRPCRFFCHRCSAEINPRLPEYTCPRCESGFIEELSVERSTENGSTSTASTSDQN
RPTFESMDHQHMFTFPPGYGQFALGIFDENFDLRAGLPAEDNRETENRREREMASRQRYS
ARQPQGRHMPRRPGQRHEGVPTLEGIIQQLVNGIIAPTAMPNIAMGPWGMLHSNPMDYAW
GANGLDSIITQLLNQFENTGPPPADRERIKNLPSIQITEEHVGSSLECSVCKEDYSVGET
VRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSLSGQNTATDPPGLSGMNFSPSSSSSSSSS
SPSNENAANNS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagctcccccacggccctgccggtttttctgtcaccgatgttcagcagagatc
aaccctcgtctcccggagtacacatgtccgcggtgtgaatctggcttcattgaagagcta
tcagtggagagaagcactgaaaatgggtccacatccactgcctccaccagcgatcagaac
cgtccgacttttgagagtatggaccaccagcacatgtttacatttccgcccggatacggc
cagttcgctctggggatttttgatgagaattttgacctccgagcggggctgccagcagaa
gacaaccgcgagacggagaaccgacgggaacgggagatggcgtcacggcaacggtacagc
gctcggcaaccacagggacgacacatgccacggcgaccgggacagagacacgaaggagtg
cccacattagagggaatcatccagcagctagtgaatggaatcatagcacccacagccatg
ccgaacattgcaatgggaccatggggcatgctacactcaaatccaatggactacgcttgg
ggtgccaatggacttgattctatcattacccagttattaaatcagtttgagaacactggt
cctcctcctgctgacagagagaggataaagaacctgcccagcatccagatcacagaggaa
catgtgggttccagtttagaatgttctgtgtgcaaggaagactacagtgtaggggagact
gtgaggcaacttccgtgcaatcacctgtttcacaatgactgcatagtaccatggctggaa
cagcacgacacatgtccagtgtgcagaaagagcctcagtggacagaacacagccacggac
cccccgggactttcaggaatgaacttctccccttcctcctcttcctcatcctcttccagc
tcccccagtaacgagaacgctgccaacaactcctag
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