Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386860
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Entry
139386860 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: microtubule cross-linking factor 1-like
KO
K27704
microtubule cross-linking factor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139386860
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
139386860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TSC22
LETM1_C
Motif
Other DBs
NCBI-GeneID:
139386860
NCBI-ProteinID:
XP_070988819
LinkDB
All DBs
Position
28:complement(46556888..46753730)
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AA seq
2083 aa
AA seq
DB search
MDRSSGSGTSEPTKPPNHQLEKKRLNRAPSPARPFLKDVRSSPKPAAIVPKSPKLTKQQH
SSSPVALSSNQSRISRRTPTGAKDNKPATVKSHSTKSSTVTKKTVKVIQHAALEPKPTTA
SASKPTPDSSTSSPHLALKAKKSKIATLTASHHGPLSLGSPIRVPTGATPLGSRVSQTDS
SSDLSDCPSEPLSDEQRLAAAASSDGESGGSGFSDRDQVDHPVQAAASASDAARAAGATA
GSGVGSLRTAEGSPAAAGKGGMSQAPGPGAHGGEGSKQEKASTTAQLIKLECSKEIIEED
LLREIEDLRSENEYLKDEVEELRAEMEEVRDSYLEEEVYQVQELRRELDRSNKNCRILQY
RLRKVEQKSLRVAQTGHVDGELLRNLEQDLKVAKDVSVRLHNELENVEDKRTRAEDENEL
LRQRIIEVEISKQALHNELDRNKETALRRRGSRETFKDKKFLNQDDSADLRCQLQFSKEE
STLMRKKMAKLGREKEELEQEIQKYKSVYGDVDSPLPLAELAGGGPHSTREAELRLRLKL
VEEEANILGRKIVELEVENRGLRAENEDIRCQYERDCFGREPFSSMPSSPYGGDALESAG
ELRRHLQFVEEEAELLRRSISEIEDHNKQLTSELNRFKFGPRDEDVDVGVMLMKTGNGGN
GGGGGNGSGVVMMEELKAARMQINELSGKVMKLQYENRVLMSNVQRCDLAQHLGLRTGSP
RDSDADSDTGRRDAAEEEETGRLLLLHPKREGPVGGESDSEDLFEKTTTTSGFGSHKPSD
EISGLSTTELANLRREDRETFMNVKREAERLGKTVDRLITDTDSLIYEGKIIVTGGDSLC
IEGFRGHRGEGSGEDRGNTTTLPESLQDSQVLDTINTRMKAFRTELHIFMEKVDHLGDGL
RERVGDRDSGDDLSPMPNLTESSSFLSGVTSMSRDSPISTLGRDLVTDFQSQSGARDELE
WRLGQERAVETQGQRHDQGVLPQGPAQNRGAILGHTRYHRAPPLASLSPEVEERRRLEVQ
GVRPRGGLDLTGLQAHEAPWVQERTLLQQEVRLFRHNTIVFYMKLRWILMHWRLGKRTET
GEETAHSEYEKLEGIPELILETEREDRDRSCTQLPQRDSPEPGPTTQLPSTERLQHQTQV
GENRRVLQAVRSLLEEFRLELREEENRRCQLQQIYANDKASWEVKWAEMKCHVAQLEEER
REEKGEVRGEDRGEMQGGGGGDKDWAFKQEREEHRCLLAESHSTSLNLHWKLQQGEKRWG
RERRGLLERFDQERQEWDSNMRNMHHKMERLQRELNVRQSSESSPSDVKDGATAGGHRGV
FSPQESPCKVPRSPRSPRSPRSATSGPVSLPTRSHSDSEAHEEQGAVVRVRGPTENIFLD
ALTLDSLGSLEVPLPSRLDSDKRFPCMNQALNEIPDIEDPMYQEEEEEEEEMGFGSLLRA
KSVCSMSDFQRLMDSSPFLPDKSRHGDCGRDDVTPPLSPDDLKYIEEFNSKGWGFPVPGP
SPTPGHHTPTPMEAWAERPTSEPFQPALWFLTTSATLTTNTLSSPEPHPLCQHSPLRGNG
GNRGGGASVHVSHSPTRSPGTPEQDYMYPKGTKGRGGGGEVGDPPGVGGPDEVFGNGRWP
STCHKELLEGGSGLGGGLRVPSGVGPIPTVGYASSLELQLSRNLSDDMKEVAFSVRNYRS
GPGTSDLLEQHRQLRDTACQTNGFTTRGTQTTQTISVGLQTDILRNLTSSPHRCLTPIGG
GSTPISSPSRNIRKIQYSPVVQSKFERTCCSPKYGSPKLQRKLSTSSKADLPVGASSSST
TGPRVPTPTTPQKGASESAWARSTTTRDSPVHTTINDGLSSLFNIIDHTPVAYEPLQSKF
TKSPSRTRPAPPDPSPPGGPGVPSLPPSDPKDPRSLGAVQEFLRNVRGRSPSPVQLIVET
QGGPGGTGGERTPEVVSIRQDLSAPPGYTLAENAARLLNKKLLEQSFREEKRLGSAGQSR
EGRHGEGDRNQAGCMEDLPRSPVAPPLESCFLRPARPANRRPPSRWAGPSSPRGWLDVTE
RRFTFPMVTGTSKTGTGTTSIPDLDETGPAESQQEPSPYPCSP
NT seq
6252 nt
NT seq
+upstream
nt +downstream
nt
atggatcgttccagtggctctgggaccagcgaacccaccaaaccgccaaaccaccagttg
gagaagaaacggttaaaccgagcaccatctccggccaggccgttcctgaaggatgtccgc
tcctcgcccaaaccagcggctatcgtaccaaaatcccccaaactgaccaagcagcagcac
tcctcttccccagtggccttatcatccaatcaaagccgcatatccaggcgcaccccaacc
ggagcgaaggataacaaaccagccacggtgaaaagtcacagcaccaagtcttcgacagtc
acgaagaagacggttaaggtcattcaacatgcggcgcttgaacctaaaccgaccactgca
agcgccagcaaaccgaccccggacagcagcaccagcagtccacacctcgccctcaaagcc
aagaagagtaaaatagccacgctgaccgcgtctcaccacggcccgctcagccttggctcc
ccaatccgcgtcccaaccggcgctacccccctcggcagcagggtcagtcagaccgacagt
agctccgatctctctgactgtccctccgaacccctatccgacgaacagcgcctggccgcg
gccgcaagcagcgatggggagtcggggggctccgggttcagcgacagggatcaggtggat
catcctgtgcaggcggcagcatcagcgtcagacgcggccagagcggcaggggctactgcc
ggtagtggtgttggttcgttgcgcaccgcggagggtagccccgcggctgctgggaaaggc
ggcatgtctcaggctccaggaccaggtgctcacggaggagaggggagtaaacaggagaaa
gcatcgaccaccgcacaattgataaaactggaatgcagcaaagagataatcgaggaggat
ttattgcgggaaatagaagatctccgctctgaaaacgagtacctcaaggatgaagtggag
gagctgcgtgcggagatggaggaagtccgggacagttacctggaagaggaggtgtaccag
gtgcaggagttacgcagggagctggaccgctccaataagaactgtcggatcctccagtac
cgtctccgtaaggtggagcagaagagcctcagagtggcccagactggacatgtagatgga
gagctgctacgcaacctggaacaggatctcaaggtggccaaagatgtgtcagtgcgtctg
cacaacgagctggagaatgtagaagacaagaggaccagggctgaagatgagaatgagctg
ctgagacagaggatcatcgaggtggagatctctaaacaggctctacacaatgaactggac
agaaataaagagaccgctctacggcggagagggagcagggaaacctttaaggacaagaag
tttctgaatcaagacgacagtgcagatctcaggtgccagctgcaattctctaaggaagaa
tccaccctcatgcgaaagaagatggccaagctggggagggagaaggaagagcttgagcag
gagatacagaagtataagtcagtctacggggacgtggacagccctctacccctggcagag
cttgcaggcggtgggccccacagtaccagggaggccgagctacggctccgactcaaactg
gtggaggaagaggctaatattctggggaggaagattgttgaactagaggtggagaaccga
ggcctgcgggctgagaacgaggacatccgctgccagtacgagagggactgtttcggccgg
gagcccttcagcagcatgccctcctccccgtatggcggagacgctctggagtcagccggg
gagctgcggcgccacctacagtttgtagaggaagaggcagaacttctccgccggtccatc
tccgagatcgaggaccacaacaaacagctgacctccgaactgaaccgcttcaagttcggc
ccgagagacgaggacgtcgatgtcggagtgatgctgatgaagaccggtaatgggggtaac
ggtggcggcgggggtaacgggagcggtgttgtgatgatggaggagctgaaggcagccagg
atgcagatcaacgagctcagcgggaaggtgatgaagctgcagtatgagaacagagttctg
atgtccaacgttcagcgctgtgacctggcccaacacctgggcctccgcaccggctcccca
cgggacagcgatgcagacagcgacaccggccgccgagacgccgcagaggaggaagaaact
gggaggctcctccttctacaccccaagagggaggggcctgtcggcggcgagagcgactcg
gaggacctgtttgagaagaccaccacgacctctggtttcggaagtcacaagccctcagac
gagatcagcgggctcagcaccacggaactagccaacctcagacgagaagaccgtgagacg
ttcatgaacgtcaaacgagaagcagagcgtcttgggaagaccgtagaccgcctcattacc
gacacggacagtctgatctacgagggaaagattatagtaacaggaggggacagtctctgc
atagaggggttcagaggacacaggggggagggaagcggagaggacagggggaacaccacc
acactccccgagtccctacaagactcccaggtcctggacactatcaacacccgaatgaag
gccttcaggacagagctccatatcttcatggagaaggtggatcacctgggagacgggcta
agggagagggtaggggaccgggatagtggggatgacctgtcgcccatgcccaaccttaca
gagtctagcagcttcctgtcaggggtcacctccatgtcccgggattcgcccatcagcacc
ctgggacgcgacctggtcacagatttccagtcacagtccggtgcgagggatgagctggag
tggcgtctaggacaggagcgagccgtggagacccagggccagaggcatgaccagggggtc
ttgcctcagggccccgcccagaacaggggagccatcctgggacacactagataccacagg
gccccccccttggcttctttaagtcctgaggttgaggaacggaggcggctggaggtgcag
ggtgtgaggcccagggggggtctggatcttactggcctgcaggcccacgaggctccctgg
gtccaggaaagaaccctactgcagcaggaggtccggttgttcagacacaacaccatcgtc
ttctatatgaagctacgctggatccttatgcactggaggctggggaagaggacagagaca
ggggaggagacagcacactcagagtatgagaagttggagggtattccagagctgatcttg
gagacggagagagaggacagggacaggtcgtgtacccagctaccccagagagacagcccc
gagcctggccccacaacccaactcccctccactgaacgcctgcagcaccagacacaggtg
ggtgagaaccgtagggtgctccaggcagtgcgctccctgttagaggagttcaggttagag
ttgagggaggaggagaacaggaggtgccagctgcagcagatctacgctaatgacaaagct
tcctgggaggtcaaatgggcagagatgaagtgtcacgtcgctcagctggaagaggagaga
cgagaagagaaaggagaggtgagaggagaggacagaggggagatgcagggaggaggagga
ggagacaaagactgggcctttaaacaggagcgagaggagcaccgttgcctcctggcagag
agccacagcacctccctgaacctccactggaagctgcagcagggagagaagaggtggggg
agggagaggagaggcctactggaacgcttcgaccaggagagacaagagtgggacagcaac
atgagaaacatgcaccacaagatggagaggctgcagagagagctgaatgtccgacagagc
agtgagagctcaccttccgacgtcaaagacggggcgacggcaggaggacacaggggtgtc
ttttcccctcaggagagcccatgtaaggtccctcgctcccctcggtcaccccgctcccct
cgctctgccacttccggccctgtttccctccccacccgctcccactcggactcagaggcc
catgaagagcagggggctgtagtgagggtcagaggcccaacagagaacattttcctggac
gctctgacgctagactcccttggtagcctggaggtcccacttcccagcagactggactct
gacaagaggttcccctgtatgaaccaggctctgaatgagatcccagacatagaggaccca
atgtaccaggaggaagaggaggaggaggaagagatgggctttggcagtctgctcagggct
aagtcagtctgttctatgagtgacttccagcgtctgatggacagctctcctttcctgcct
gacaagagtcgtcatggtgactgtggccgtgatgacgtgaccccacccctttcacctgat
gacctgaagtacatagaggagttcaacagtaaggggtggggctttcctgtccctggcccc
tcccctacaccaggccaccacacccccacacccatggaagcctgggcagaacggcccacg
tcagaaccattccagccagccttgtggttcctgacaaccagtgctacgcttactactaac
accctgtccagccctgaaccccatcccctctgccagcactcccctctcaggggtaacggg
ggtaacagaggagggggggcaagtgtccatgtctcccacagccccacccgatccccagga
acccctgaacaggactacatgtaccccaaagggaccaaagggcgagggggtggcggtgag
gtgggggatccccctggggtagggggaccagacgaggtatttggtaatggtaggtggccc
tccacctgtcataaggagttattagagggtgggagtggactgggaggcggacttagggtt
ccgtctggcgtgggccccatccccacggtggggtacgcctcatctctggagctgcagctg
tcacggaacctcagtgatgacatgaaggaggtggccttctccgtacggaactaccgctca
ggccctggtacctcggacctcctggagcaacacagacagctccgagacacggcgtgtcag
accaacggtttcactactcggggaacccagaccacccagaccatcagtgtgggcttacaa
actgacatcctccgcaacctcaccagctccccccaccgctgcctcacccctataggagga
ggctccacccccatctcctccccctccagaaacatccgcaagatacagtactctcctgta
gtccagtccaagttcgagcggacatgttgttctcctaagtacggttctcctaagctccag
aggaagttgtcgacatcatcgaaggctgacctccctgtaggggcctcctccagctccacg
accggccccagggttccgactcccaccaccccccagaagggagcctctgagtcggcctgg
gctcgttccaccaccaccagggactctccggtccacaccaccatcaacgacggcctgtcc
agcctcttcaacatcatagaccacacccccgtagcttacgaacccctgcagtccaaattc
accaagtccccaagccgcacccgccccgctccccctgacccctcacctcccggggggcca
ggggtacccagcctaccaccctcagaccccaaagaccccaggtcccttggagcagtccag
gagttcctgaggaatgtccgtgggcgttctcccagcccggtgcagctgatagtagagacc
cagggagggccggggggaacaggaggggagaggacaccggaggtggtcagtatacgccag
gacctgtctgccccgcctggatacaccctggcagagaacgcagcccgtctgctgaacaag
aagctgttggaacagagcttcagggaggagaagagactggggtctgccggccagagcaga
gaggggaggcatggagaaggagacaggaaccaggcggggtgtatggaggacctccctcgc
tccccggtggctccgcccctggagtcgtgtttcctgcgcccggcgaggccagccaaccgc
cgccccccctcccgctgggcaggcccctcctccccccgaggctggctagacgtcacagag
cggaggttcaccttccccatggtgactgggaccagtaagactgggactgggaccacctct
ataccagacctggatgagactggaccagcagaatcacaacaggaaccatcaccatacccc
tgttctccttaa
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