Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386863
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Entry
139386863 CDS
T10872
Name
(RefSeq) zinc finger protein SNAI2-like
KO
K05706
snail 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
139386863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139386863
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
139386863
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_6
zf-C2H2_jaz
zf-Di19
C2CH-3rd_BIRD-IDD
Zn_SUZ12
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451_1st
zf-met
Teflon_C
Zf-C2H2_ZNF451_6th
zf-C2HE
Ogr_Delta
zf-C2H2_15
DUF7410
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
139386863
NCBI-ProteinID:
XP_070988821
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All DBs
Position
28:complement(28671863..28674710)
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AA seq
260 aa
AA seq
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MPRSFLVKKHFNSSKKPNYSELESPIVFISPYLYKGLPLPVIPQPEILSSVVYNPITVWT
TSSLPLSPLSSDLSPISGYPSSLSDTSSKDHSGSESPRSDEDERMLTKLTDPHGVEAEKF
QCSLCKKSYSTYSGLLKHKQLHCDAQTRKSFSCKYCEKEYVSLGALKMHIRTHTLPCVCK
ICGKAFSRPWLLQGHIRTHTGEKPFSCPHCSRAFADRSNLRAHLQTHSDVKKYQCKNCSK
TFSRMSLLHKHEESGCCVVH
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgccacgctcgtttcttgtcaagaaacatttcaactcatctaagaagccaaattatagc
gagctggaaagccctatagtatttatttcaccgtatctctacaagggccttccattgcca
gtcatccctcaaccggagatccttagctccgtggtttacaaccctatcaccgtatggact
acgagcagcttgccgttatccccgctttcaagtgacctgtctcccatctctggatacccc
tcatcgctctctgacacctcatccaaagaccacagcggctctgagagtcccaggagcgat
gaagacgagcggatgcttaccaaactaacagaccctcatggagtggaggcagagaaattc
caatgtagtttgtgtaaaaagtcctattctacttattctggactgctgaagcataagcaa
ctgcactgtgacgctcagacgaggaaatcattcagttgtaaatactgcgaaaaggagtac
gtcagtcttggagcgctaaaaatgcacatcagaactcacactttgccttgtgtctgtaaa
atatgtggcaaagctttctcaagaccgtggttgcttcagggacacatcagaacgcacact
ggagagaagcccttctcctgcccccattgcagtagggcttttgcggacaggtccaacctc
agggcacacctacaaacccattcggatgtgaaaaaataccaatgcaagaactgttccaaa
accttctccagaatgtctcttctgcacaagcatgaggaatctggttgttgtgtagtacat
tga
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