Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386868
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Entry
139386868 CDS
T10872
Name
(RefSeq) polycomb complex protein BMI-1-B-like isoform X1
KO
K11459
polycomb group RING finger protein 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
139386868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139386868
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
139386868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-rbx1
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
139386868
NCBI-ProteinID:
XP_070988828
LinkDB
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Position
28:complement(5000442..5017540)
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AA seq
334 aa
AA seq
DB search
MSIGFYNFRTMHRTTKIKITELNPHLMCVLCGGYFIDATTIVECLHSFCKMCIVCYLETS
KFCPICDVQIHKTKPLLNIRSDKTLQDIVYRLVPGLFKDEMKRRRDFYVAHPSLDAGNGS
NEERGEVADEEKRIIADNEIISLSIEFFHQSKLGNEDGEVKDTKTEMIDKRYLQCPAAMT
IMHLRKFLRSKMDIPCTYQIEVMYEDEPLTDYYTLMDIAHIYTWRRNGPLPLKYRVRTGC
KKMKMSSPRNGAKTTQHAGGVCYDSGTGGDKHLNNDPEAPSTSSSSLPSPSHRIVHSSSS
SLTHFPHLSSIGTSTNGILTKAGPNQLSRTFTPT
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcggattttacaattttaggacaatgcacagaacaacaaaaatcaagattact
gagctgaatccacatttgatgtgtgtcttgtgcggcggatattttatcgacgcaaccacc
attgtggagtgtttacactcattctgtaaaatgtgcattgtttgttatctggagaccagc
aaattctgtccaatttgtgatgtccagattcacaaaacgaaaccccttttgaatattagg
tctgacaagacccttcaagacattgtttacaggttggtacctgggcttttcaaagatgaa
atgaaacgaaggagggatttctatgttgcacatccttctcttgatgctggaaatggatca
aatgaagagcgaggggaggtggcagatgaagaaaagagaataatagccgacaatgagatt
ataagcctgtccattgaattttttcatcagagcaagctgggaaatgaggatggtgaagtc
aaggatacgaagacagagatgattgacaagcgatacttgcaatgtccagcagccatgacc
ataatgcatctgaggaaattccttcgaagtaaaatggatattccatgcacctatcagata
gaagttatgtatgaagatgaaccattgacggattactacacattaatggacattgcacac
atctacacctggagaaggaatggtcccttgccattgaaataccgggtacgaacaggctgc
aagaagatgaagatgagcagcccaagaaacggggccaaaaccacacaacatgctggagga
gtatgctatgactctgggactgggggtgacaagcatctgaacaatgaccccgaagctccc
tccacctcatcctcctctctgcccagtccgagccacagaattgtccactcatcatcatca
tcgcttacccacttcccccacctctccagcattggcacctcaacaaacggtatcttaaca
aaagcgggtccaaatcaactttcccggacattcacgccaacatag
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