Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386899
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Entry
139386899 CDS
T10872
Name
(RefSeq) semaphorin-6B-like
KO
K06842
semaphorin 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
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Gene cluster
GFIT
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NCBI-GeneID:
139386899
NCBI-ProteinID:
XP_070988872
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Position
28:35659152..35689475
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AA seq
903 aa
AA seq
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MTTMAPPFMFLLLLLRLAHSSFPEEPGPLSYAPLEVVRRYPVFVGRAHHSSQRQELHIQT
VLQVNRTLYIGARDDLYRVELDNMSGDEMFYSKKRTWESNKNDIRVCRMKGKHEEECRNF
IKVVLSQHEGLFVCGTNAFNPLCANYTRDSLEMVGETVSGMARCPYDPRHANVALFAEGS
LFTGTVTDFLAIDAVIYRSLGDSPALRTVKHDSKWFREPFFVSAVEWGPHVYFFFREMAM
EFHHLEKVMVSRVARVCKGDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNLLHATSP
ILNMNGRDVILGLFSTPPNSIPGSAVCVFDMQQLARVFEGRFKEQKSPESIWTPVPDELV
PKPRPGGCAVQGSPFSSSKSLPDEVLNFVKTHPLMDETIPLVGHRPWVVKTMGRYQLTAM
VVDTEAGPHRNHTVLFLGSTRGTVLKFLILPSGENSPTHSSVFLEEVEGFNPEKCGEDSV
QARQLLFLSLDRPSHTLLLAFTSCLVRLPTARCHLHSRCMKSCLTSRDPYCGWTRGSTCS
FLRPGTRLPFQQDSEYGNFSHLGDCDGAIQQSLLIEPESLVSLNLLVASAVSAFTIGAAL
SGLAVCWIMAHKPGNRRHGNNTPQSTIQRQERGMLTSGGGMGGSVLSVTRQGGGDRPCSQ
GGETLFVMPNGWGKSGELDPGFLPTPEHTPQQKRRGLRLSDSGSGGWDNSQTYLGGSTMG
LASPCPLPCPPHPSTAVYLTTRLFQGGGGGRHGGEERGRGGETPRQHYVCLSKPRGEKGR
SGTPKSALRKSAGEYVYPMTPQDSPDRRRVVSAPSAPMEFGEPLPLRWPPQEGYILSSQG
MVPVPPSSMPTIKGQQYVAQHHTPGPGRSQLRGALGRGELGELVDLSQLLSKKSSNERTH
NGQ
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccatggcccctcccttcatgtttctcctccttctcctccgattggctcacagt
tctttcccagaggagcccggtccgctcagctacgctcccttagaggtggtgaggaggtat
cctgtgtttgtgggtagagctcatcattcctctcagagacaggagctgcacattcagaca
gtgctccaggtcaaccgcactctctacataggagccagagatgatctatacagagtggag
ctggacaatatgtcaggggatgaaatgttctacagcaagaagcggacgtgggaatccaat
aagaatgacattcgagtctgcagaatgaagggcaaacatgaggaggagtgtcgtaacttc
attaaggtggtgttgagtcaacatgaaggactgtttgtgtgtggaaccaatgccttcaac
cctttgtgtgccaactacactagagactctttggagatggtgggagagacggtcagtggg
atggctcgttgcccgtatgaccccagacacgccaacgtggctctgttcgcagagggcagt
ctcttcactggtactgtaacagacttcctggcgattgatgctgtgatctatcgtagccta
ggcgacagccccgctcttcgcactgtcaaacacgactccaaatggttcagagaacccttc
tttgtgagtgcagttgagtgggggcctcacgtctacttcttcttcagagaaatggccatg
gagtttcatcacctagagaaggtgatggtatctcgtgtggcgcgggtgtgcaaaggggac
atggggggctctcagagggtgttggagaaacagtggacatcgttcctgaaggccagactg
aactgttctgtcccaggagactcccacttctatttcaacctgctccacgccaccagcccc
atactcaacatgaacggcagagacgtcatactgggactgttctcgacaccacccaacagt
atcccagggtctgcagtctgtgtgtttgacatgcagcagttggccagggtgtttgaggga
agattcaaggagcagaaatctccagaatccatctggacacccgtgcctgatgagcttgtg
cccaaacccaggccgggtggctgtgcggtgcaggggtctcctttcagctcatctaagtct
ctgccggatgaagtgctgaactttgtaaagactcatccattgatggacgagaccataccc
ttggttgggcacagaccttgggttgtcaagactatgggcaggtaccagttgaccgcaatg
gtggtggacacagaggctggtccccataggaaccatacagtgttgttcctgggctccacg
cgagggaccgtcctaaaattcctcatcctccccagcggagaaaactctcccacacacagc
agtgtgtttctggaggaggtggagggattcaaccctgagaaatgtggagaggactctgtc
caggccagacagttgttgtttctgtctctggatcgtccaagtcacactctgctgctggcc
ttcacttcctgtctggtcagactgcccacagcacgctgccacctacactcacgctgtatg
aagagctgtctgacctcccgagatccctactgtggctggaccagaggcagcacctgctcc
ttcctcagaccaggcacacggcttccttttcaacaagacagtgagtacggcaacttctcc
catcttggagactgtgatggtgccatacagcagagtctgctgatcgagccggagagcctg
gtctccctcaacctgctggtggcatctgcagtctcagccttcaccatcggtgcggcgctc
tcggggctggctgtctgctggattatggcccacaagcctggcaaccgtcgccacggcaac
aataccccccagtccactatccagcgccaggagagggggatgttgacgtcaggaggaggg
atggggggatcggtcctcagtgtgacccgtcagggaggaggcgatagaccctgctctcag
ggcggggagaccctgtttgtgatgcccaacggctgggggaagtcaggggagctggaccca
gggttcctgcctactccggagcacacgcctcagcagaaaagacgcgggctcaggctgtct
gattctggatcaggggggtgggataacagccagacctacctgggagggagtaccatgggg
ctggcgtctccctgccctctcccttgccccccacacccctccaccgctgtctacctgacc
accagactatttcaggggggaggaggagggaggcacgggggtgaggagcgaggaagagga
ggggagactcctcgccagcactacgtgtgcctgagcaagccccggggggagaagggcaga
agtgggacaccgaagtcggcgcttcgtaagtcggcaggggagtacgtgtaccccatgacc
ccccaggattctccggataggaggagggtggtgtcagcccccagcgcccctatggagttt
ggggagcccctgccactccgctggcctccccaggaaggctacatcctcagcagccagggc
atggtccctgtacctccatcctccatgcccaccatcaaaggccagcagtacgtggcccag
caccacacacccgggccgggcaggtctcagctgagaggggccttggggagaggagagctg
ggggagctggtggatctcagccagctgctgagtaagaagagttccaatgagaggactcac
aacgggcagtga
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