Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386959
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Entry
139386959 CDS
T10872
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139386959
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
139386959
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
DALR_1
IRK
Motif
Other DBs
NCBI-GeneID:
139386959
NCBI-ProteinID:
XP_070988971
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All DBs
Position
28:complement(11633494..11691894)
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AA seq
974 aa
AA seq
DB search
MRHRYAGAVYQHQIPDEERGSVQSQDPNPVAPVFSLPPPPPSFRERSTTTSHYLNHHQLP
CLSKPSRRGIHACQPQHGDPPPLTSYDIAQRPSHRVCEPAGQPAHLQQNLWAAAGSQPQS
EQPFFQSCHCNCSEEASLSHQRQPLTHPPQPSPSLPPSSSLLFLQESNHGDNLQSSDNYQ
QASNVERYRGGGGGGHRDQKQLLQQQQQQHSRLQHRDPSPETTRANSQKGRTINVCESIE
ANRRAFESQTQDLQQLQQLPQLRAQQQLLVGSSFPVYYCANGSGELCRNNQATLLQQHQQ
DAQGRPQHCDQDRNKPGRTNQANQPQHPNQPPHPNQPQHHCRDSRVNSPTQPYGGNSSAT
GSSSKSSPNYGSSYHLWPESPHKGEERILIDHHQATTEQKKLSHAGSSLSESSGRLPQIA
MNTCKHNGGVVRPLGSLASSRRNLAELDSETQPLQTLHSSGLEVVVSKGNSEDPGKASNE
SLVRDGNGAPVKKNKDIGYRLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVY
GKVISESSYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFI
VLELLVCAIHPIPGHYRFTWTARIAFTYTPSTANADVDIILSIPMFLRLYLIGRVMLLHS
KLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERDTM
YHDTQEVTSNFLGAMWLISITFLSIGYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVA
RKLELTKAEKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRK
FLQAIHQAQKLRSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGMLE
DKLDSVTGSLQALPCLISQAITQQQQEFLDGFLHRFRPASLGSERSERSERSWTSTARRR
RSPSTAPHTSSDSG
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgaggcatcgatacgcgggagctgtctatcagcaccaaatccccgacgaagagcgaggc
agcgtgcagagccaagacccaaacccagtcgctccagttttcagtctgccgccccctcct
ccgtctttcagagagcgttcgactaccacctcgcactacctgaaccaccaccaactgcct
tgtctgagcaagccctctcgaagaggtatccatgcctgtcagccgcagcacggcgacccc
ccgcctctaacaagctacgacatcgcccagcgaccttcacaccgggtctgtgaacccgca
gggcagccagcacacctacagcagaacctttgggccgcagccggttcccagccgcagtcg
gagcagcctttttttcagagctgccactgcaattgttccgaggaggcgagcctttctcac
cagcgccagcccctcactcacccgccgcagccctctccatctttgccgccgtcgtcctct
ctgctgtttttgcaggaatctaatcacggggataatttgcaaagcagtgacaattatcaa
caggcgagcaacgtggaacgctaccggggaggtggaggaggagggcaccgagaccagaag
cagttgttgcagcaacagcagcagcagcacagcagactccaacacagggacccctcccct
gaaacaacccgagcaaactcacagaaggggcgcactataaatgtatgtgagtcaatcgag
gctaatcggcgagcattcgagtcccagactcaggacctgcaacagctacagcaactccca
caattgcgagctcaacaacagcttctggtggggagcagcttccctgtctactactgcgcc
aacggttcaggagagctctgtcggaataaccaggcaacactgctgcaacagcatcagcaa
gacgcacaggggcgtccgcagcactgtgaccaagaccgcaataagccagggaggacaaac
caagccaaccagccacagcaccccaaccagccaccgcaccccaaccagccgcagcaccat
tgccgcgactctcgtgtaaactcaccaacgcagccgtacggagggaactcgtctgcgact
ggcagtagcagcaagagcagccctaactacggctccagctatcacctgtggcccgagagc
ccgcataagggagaagagaggatactcatcgatcatcatcaggcaaccactgagcaaaag
aagctgagccatgctggatcctccctctccgagagcagcggccgactccctcagatagcc
atgaacacctgcaagcacaatggcggcgtagtgagaccactgggcagcctggcgtcgtcg
cggcgcaacctagcagagctcgactccgaaacacagcccctccagacgctgcacagttct
ggcctggaggtggttgtttccaagggaaacagtgaggaccccggcaaggcgtccaacgag
agcctggtcagggacgggaacggtgctcctgtgaagaagaacaaagacatcggctataga
ctcggccaccggagggcgctctttgagaagcgaaagagactcagtgactacgccctcatc
ttcgggatgtttgggattgtcgtcatggtgacggagacggaactgtcctggggagtttac
ggcaaggtaattagtgaatcttcgtactcatttgcactgaaatgccttatcagcctttcc
actgttatattgcttggtcttataataatgtaccatgcccgggaaatccagctgttcatg
gtggacaatggggcggacgactggaggatagccatgacgtacgagcgcatcttcttcatc
gtgctggagctgctggtgtgcgccatccaccccatcccgggccattaccgcttcacgtgg
acggcgcggatcgccttcacctacacgccgtcgacggccaacgccgacgtggacatcatc
ctctccatccccatgttcctgcgcctctacctgatcggccgcgtcatgctgctgcacagc
aagctcttcacggacgcctcgtcgcgcagcatcggcgccctcaacaagatcaacttcaat
acgcgcttcgtcatgaagaccctcatgaccatctgccccggcaccgtgctgcttgtcttc
agcatctcctcctggatcattgccgcctggacggtgcgcgtctgcgagagggataccatg
tatcatgacacacaggaagtgaccagtaacttcctgggagccatgtggctcatctctatt
accttcctctccattggctacggagacatggtacctaacacgtactgtgggaaaggcgta
tgtctgcttacagggatcatgggagcgggctgcactgcgctggtggtcgccgtggtagcc
aggaagttggagttgaccaaggctgagaagcatgtccacaacttcatgatggacacacaa
ctctgcaaacgagtaaagaacacagctgccaatgtactcagggaaacatggctcatctac
aaacacactaagctggtcaagaagatagatcacgctaaggtgcgcaaacaccagcggaag
tttctacaggccatccatcaagctcagaaactacgcagtgtaaagatggagcagaggaaa
ctcaacgatcaggccaacacgctagtggacctggcgaagacccagaacgtgatgtacgac
ctggtgtcagagttgcaggagcgcagcgaggagctagacaagcgcatcggcatgctggag
gacaagctggactcggtgacgggcagcctacaggcgctgccctgcctcatctcccaagcc
ataacccagcagcagcaggaatttctagacggtttcctgcaccgcttccggcctgcctcg
ctgggctcagagcgctccgaacgctcagagcgctcctggacctccaccgcccgccgacgc
cgctcgccctccacggcgccacacacctcctctgacagcggctag
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