KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386993
Entry
139386993         CDS       T10872                                 
Name
(RefSeq) transcription factor HES-1-B-like
  KO
K06054  hairy and enhancer of split 1
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03460  Fanconi anemia pathway
ocla04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    139386993
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    139386993
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ocla03000]
    139386993
   03400 DNA repair and recombination proteins [BR:ocla03400]
    139386993
Transcription factors [BR:ocla03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Hairy, Hairy/E(SPL)
    139386993
DNA repair and recombination proteins [BR:ocla03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex binding factors
     139386993
SSDB
Motif
Pfam: Hairy_orange HLH Spectrin_1st_PEPL
Other DBs
NCBI-GeneID: 139386993
NCBI-ProteinID: XP_070989027
LinkDB
Position
28:complement(10097994..10099766)
AA seq 264 aa
MPADISEKTSPSSVAATPSRVSGTPDKPRTASEHRKSSKPIMEKRRRARINDSLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNMQRLQMTAAISRDPSVFGKYRAGFSECMSE
VTRFMSTCGGVNTEIRSRLLSHLAGCVSQINTVNFSTQCQIPTYPPHPLLAQAIAQIPSA
SPQLNGIMPCKSGSPINLTSEMAKLYSGLQIVPGATDGQFAILIPSVALTHTSAPNAIHG
NPALAVPVSLVAPPVTADSVWRPW
NT seq 795 nt   +upstreamnt  +downstreamnt
atgccagctgatatttcggagaaaacatccccatcctctgtcgcagccactccgtcgagg
gtcagtggaactccggataaaccaaggactgcctcagagcacagaaagtcctcaaagcca
attatggagaagagaagacgtgcgcgaatcaatgatagccttggtcagctaaagaccctc
atcttggatgcactaaaaaaagatagctcgagacattcgaagctcgagaaggcggacatc
cttgagatgactgtgaagcatcttaggaatatgcagcgtctccaaatgactgcagctata
agcagggatccatcagtctttggcaagtacagagcgggattcagcgaatgcatgagtgaa
gtcacccgttttatgtccacgtgtggaggggtgaacacggagatcaggtctcgacttctc
agccacttagccggctgtgtgtcacagataaacaccgtaaacttctcaactcaatgccag
atccccacctaccctccgcatccattgcttgcccaagccattgcgcaaatcccaagtgca
tctcctcagttaaatggaataatgccttgcaaaagtggctcccctatcaacctcacatca
gaaatggctaaattatacagtggacttcagattgtgccgggggcgacagatggacaattc
gctattctgattccaagcgtggctcttacgcatacgagtgcgccaaacgcgatacatggc
aatccagcacttgcggtgcctgtgtcacttgttgcgcctcccgtcaccgcagactccgtg
tggagaccatggtag

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