Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139387015
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Entry
139387015 CDS
T10872
Name
(RefSeq) transcription factor E2F5
KO
K04682
transcription factor E2F4/5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04110
Cell cycle
ocla04218
Cellular senescence
ocla04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139387015
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
139387015
04218 Cellular senescence
139387015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139387015
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
139387015
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Paralog
GFIT
Motif
Pfam:
E2F_CC-MB
WHD_E2F_TDP
T4SS_LegC2C7
Motif
Other DBs
NCBI-GeneID:
139387015
NCBI-ProteinID:
XP_070989065
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Position
28:13148475..13153726
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AA seq
385 aa
AA seq
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MAESVRSSLPNGGAASSRHEKSLGLLTIKFVTLLQEAKDGVLDLKVAADSLAVRQKRRIY
DITNVLEGVGLIEKKTKNIIQWRGENLGCQTAEVLEQVEVLTAQLCELEEQEKELDSQKA
WLEQSIKHMNDDPIASRYMYVTHEDICDAFSGDTLLAVVAPSGTQLEVPVPETGQRGQKR
YQVNLRSTSAPIQVMLINKESGSSRPVVFSVPPPEDLSSMPTPPTTPADLQRFPLPSDSA
HFPSPVTHHISEHKMAPLRRHDEDLTPSSTPPDIHMECHPQATTGLAMQQLVGMPTGVQQ
QGVLGGHLGQELQSMLDMGSLLKLTNTGDHMKEEREGVADLIDELMSSDVFPLLRLSPNA
GVDYNFNLDDNEGVCDLFDVQILNY
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtctgtgcgctcgagcctgccgaacggcggagccgcatcgagtcgacatgag
aaaagtttggggctcctcacaatcaagttcgtgactttactccaagaggcgaaggacggc
gtacttgacctgaaagtggctgcagacagcttggccgtgagacagaagaggaggatctat
gacatcaccaacgtgctggagggagtgggcctcatcgagaagaaaaccaagaacataatt
cagtggagaggggagaacctgggctgccagacagcagaggtgctggagcaggtggaggtg
ctgacagctcagctgtgtgagctggaggagcaggagaaggagcttgacagccagaaggcc
tggctggagcagagcatcaaacacatgaacgatgaccccatcgccagcaggtatatgtat
gtgacccacgaggacatctgtgatgcgttcagcggagacactctcctggcggtggtcgct
ccctcaggaacacagctggaggtaccggtgcctgaaacgggtcagagaggccagaagagg
taccaggtgaatctaaggagcacgtctgcgccgatccaggtgatgctcatcaacaaagag
tctggttcctccagacccgttgtgttctctgtgcctcccccagaggacctgtcttctatg
cctaccccacccaccacccctgcggacctgcagaggttccccctgccctctgactcagcc
catttccccagccctgtgacacaccacatctctgaacacaagatggcgccactgcggagg
cacgatgaggatcttacaccctcctccaccccaccagacatacacatggaatgccaccct
caggcgactactggtctagcaatgcagcagttggtcggcatgccaacaggtgtccagcag
caaggggttctgggaggacacttgggccaggagctccagtccatgctggacatgggcagc
cttctgaaattaaccaacacaggagaccacatgaaggaagagagagagggtgtggctgac
ctaatagatgagctgatgtcttctgatgtgttccctctgctgcgactgtctcccaatgca
ggggtggactacaacttcaacctggatgacaatgagggagtctgtgatctgttcgacgtc
caaatcctcaattactga
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