Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139387053
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Entry
139387053 CDS
T10872
Name
(RefSeq) rho GTPase-activating protein 29-like isoform X1
KO
K20644
Rho GTPase-activating protein 29
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
139387053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139387053
Membrane trafficking [BR:
ocla04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
139387053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
GMIP-like_FCH
RHG29_45_N
C1_1
Motif
Other DBs
NCBI-GeneID:
139387053
NCBI-ProteinID:
XP_070989133
LinkDB
All DBs
Position
28:complement(45003342..45091539)
Genome browser
AA seq
1685 aa
AA seq
DB search
MIRKSSSGTGGGGEEGNNTKHQQNKQHRSSITTQGPSRLSNMGRSSRTTNPLGSMGLGPN
SLGLGSTVVGAPGVDPDYVMQLVNDVRRFSDMLLSLKEAFHSEESHEGLPQRVQERLREL
LRVLKSVIGKHQTLNSVDILRAAGTVITKVKGVNFTEVNQEKKTVIFSEIHTSIDSLAFT
FGNVVSDFLMGDVDSQSGLGIPQTRRSRSFENLSVDSGGYVPEKKGLVGPEVALSKEEEV
DVILQKNDSGVESALLYAKAWSKYTKDLLAWVDKRLGLDIECAKSYAKMAESAKTLASQQ
DYLPFRDIYISTFKNDIEYSQLLLQTATGLQTNKFIQPLLSRKTELDKLRKDIKEQWQRE
QKKMQESEAALRKARWTQVQRRDEYHKAQSSASRSQEEQSKQLDKKRKLEEEALQKAEDA
RDQYRSCVTDAGARRAVLASTKTDILTQIRELVTQCDLTLKAVTVNWLQLQQAQTVSLPG
HYQALCENAKMYEPGQRYAEFVRNLPKDQIHMESFSVDERFPVFNKRSTGSTSSHSNLSQ
VSLISGDVLSGDEVDSPLGSRPEERSNSATDIQGLRGGQGPLRAWASGVQDRGMCSDSES
AGGSSESQSMDSPTASPGDFKRRLPRTPSTGTMSSADDLDERQPPSPSDNGLGEMVTETA
SSPGPFRNAQMSKASQTHKLRKLRAPSKCRECDSLVVFHGAECEECSLACHKKCLETLAI
QCGHKKLQGRLQLFGIDFTQAAKNSPEGIPFIIRKCTSEIENRALNLKGIYRVNGAKSRV
EKLCQAFENGKDLVELSDLSPHDIANVLKLYLRQLPEPLILYRYYNDFIGLAKESQRVII
EEKAVARALQDQGRPGGEQPRPGGTQPGVEGEQPPLTTSQPGGGELPKQPSIKLNRVIFK
IRDLLRQLPPAHYRTLCFLMAHLHRVTEQAEENKMTASNLGIIFGPTLVKPRQTDAEVSL
SSLVDYPYQALMVELLVRHFQVIFDLSSPSSYPPTTTSTVGQTSPRLTPREKEQRLSPSS
YPPTTTSTVGQSSPRLTLQEKEQRLSRHSTSLLDMKEQSAKVDKRHSSVIQSSQTLDDVR
EVKTDRTGPDRRELTAGSSSSTAGSSSSAAGSSSSSAAGSASVQRSTLVFGRPSLNLSSS
ATAPKVKLRPQRARILSRPISMPLERLPLPTPSQVLDRNSRNNNAAITLDPTANTIVESA
EPEKETEKPRIGGGSRVSTYYIDTQQAVQRRPWDRKYKHYDVTPRTAMIMANLPPAGTGP
GPKPGKQPTMPTQLSVSGPTSSALPSSSSFSTIFPNNPYTVSLKAGQASTRDREETKDRP
NSSAGGGGESRTSTNSPIKFRQPRILQPPPGTFYKPSGYSGARGWPSLSTSGTTSLTKMS
PTSPTVKASSQTSPTVKASSQTSPTVKTSSQTSLTVKTSSQTSPTVKTSSQTSPTVKTSS
QTSPTVKTSSQTSPTVTASSQTSPTVKTSSQTYPTVKTSSQTSPTVKTSSQTFPTVKASS
QTSPTVKTFPTSPTVKTSSPTAPTVKASSQTSPTVKTFSPTSPTVKTFSPTSPTVKTFPT
SPTVKTFPTSPTVTAPLPLSSSQSSSMTFSSSPMVTTTTPSPTATYILQTSHLPTHTLQD
SVDSSVSVDPEVTTSADFSPRQSPPPSSPEDPSSTEVVPLQQRLRPRPRPGARLQELEHR
EAHFV
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgatacggaagagcagcagtggtactggaggaggaggagaagaagggaacaatacaaaa
caccaacagaacaaacagcatcgctccagcatcaccacccagggcccgtctcgtctctcc
aacatgggccggagctccaggaccaccaacccactggggagtatggggcttgggcccaac
agtttgggtctggggtccaccgtggtaggagcgcctggggttgatccggactatgtgatg
cagctggtgaatgacgtacggaggttttccgatatgctgctcagccttaaagaagccttc
cattctgaagaaagccacgagggactccctcagcgggtacaggagcggttgagggagctg
ctccgtgttctcaagtctgtcatcggcaaacaccagaccctcaactctgtagacatcctc
agggctgccggcaccgtcatcactaaggtcaaaggcgttaacttcacggaagtgaaccag
gaaaagaaaacggttatattcagcgagatacacacgtccatcgacagtttggcattcaca
tttggcaatgtagtgtctgacttccttatgggagatgtggacagccaatcagggttgggg
atcccccagaccagaagaagcaggtcttttgagaacctctctgtggattctggggggtat
gttccagagaagaaaggccttgtgggcccagaggtggcgctgtctaaagaggaggaagtt
gacgtgatcctgcagaagaacgacagcggggtggagtcagctctgctctatgccaaggcc
tggtccaagtacaccaaggatctgctggcctgggtcgacaaacgcctgggactggacatt
gaatgtgccaaaagttatgccaaaatggcagaatctgcaaagacgctcgcgagtcaacag
gactatctgccgttcagagatatctatatttctacatttaagaatgacattgagtacagc
caactcctcctgcagactgccactggcctgcagaccaacaaattcatacagccgctgttg
tccagaaagactgagctggacaaactgaggaaagacatcaaggagcagtggcagagagaa
cagaagaaaatgcaagagtccgaggcggctctgcgtaaggctcggtggacccaggtccag
aggagagacgagtaccacaaggcccagtcctcagccagccgctcccaggaggaacagtcc
aaacagctggacaagaagaggaaactggaggaggaggctcttcagaaggctgaggatgcc
agagaccagtacagatcctgtgtaactgatgcaggggccaggagggcagtgctggccagc
accaagacagacatcctcactcagatcagagaactggtgactcagtgtgacctcacactc
aaagctgtgacagtcaactggctccagctgcagcaggcccagaccgtgtctctccccggc
cactaccaggccctgtgtgaaaacgctaagatgtacgagcctggacagagatacgccgag
tttgtccgtaatcttcccaaagatcagatacacatggagtccttctccgttgacgaacgg
tttcctgtgttcaacaagcgttcaacgggcagcaccagttcccatagtaacctgtcccag
gtgtccctcatctccggtgatgtcctgagtggcgacgaggtggatagtcctctggggtca
cgacctgaggaaaggtccaacagcgccacggacatacaaggtctgagagggggacagggc
ccgttgagagcctgggcatcaggtgtccaggacagggggatgtgtagtgactcagagagt
gctggaggcagcagtgagtcccaatccatggactcccccacagcgagcccaggtgacttt
aaacgcagactacccagaaccccctccactggcactatgtcctcggcagacgacctcgat
gagagacagccaccttcaccctcagacaatggtctgggtgagatggtgacagagacagcc
agttcaccaggtccgtttcgtaacgcccagatgtccaaggcgtctcagacacacaagctg
aggaaactcagagctccgtctaaatgcagggagtgtgacagtctggtggtgttccacgga
gcagaatgtgaagagtgctccctggcgtgtcataagaagtgtctggagactctggccatc
cagtgtggtcataagaaactgcagggaagactacagctgtttgggatagactttacccag
gcagcgaagaacagcccagaagggatccccttcattatcaggaagtgtacctctgagata
gagaacagagcgctcaacctcaagggaatctaccgtgtgaatggggcgaagtctcgtgtg
gagaagctgtgtcaggcgtttgagaacggcaaagacttggtagagctctctgacctctca
ccccacgacattgccaacgtgctcaaactctacttgagacagttaccagagccgttgatc
ctgtaccgttactataatgacttcatcggattggccaaggagagccagagggtgatcatc
gaagagaaggctgtagccagggccctccaggaccaggggcggccagggggagaacaaccc
cgaccaggaggcacccagcctggggtagagggagagcagcctcccctgacaaccagccaa
cctggaggaggagagctgcccaaacagcccagtatcaaactcaacagagtcatctttaag
attagagacctgctacgacagcttcctcctgcacactacaggaccctctgcttcctcatg
gcacacctacatagggtgacggagcaggcagaggagaacaagatgacagccagtaatctg
ggcattatctttggccctacgctggtcaaaccccgacagactgacgcagaggtctccctg
tcttctctggttgactatccctaccaggctctgatggtggagctgctggtacgtcacttc
caggtcatctttgacttgtctagcccctcttcctatccccccaccaccacctccacggtg
ggccagacctccccccgactcacccctcgggagaaggagcagagactcagcccctcctcc
tacccccccaccaccacctccacggtgggccagtcctccccccgactcacccttcaggag
aaggagcagagactcagccgccactccacctccctgctcgacatgaaggagcagagtgcc
aaagtcgacaagaggcactcgtcagtcatccagtcctctcaaaccctggatgatgtgaga
gaggtgaagacagacaggacaggaccagacaggagagagttaacagccggctcctcctcc
tccactgctggctcctcctcctctgctgctggctcctcctcctcctctgctgctggctct
gcctcggtccagagatctaccctggtgtttggccgtcccagcctcaacctctcctcctct
gctacggccccgaaggtcaagctccggccccagcgcgctagaatcctgtctcgaccaatc
agcatgcccctggagcgcttgcccctccccaccccctcacaggtgctcgacagaaacagc
cgtaacaacaacgctgccatcacgttggatcccaccgctaacaccatcgtggagtcagcc
gagccggagaaggagacggagaagcctcggattggtggggggtcaagggtcagtacctat
tacatcgacacccagcaggccgtgcagcggaggccctgggacaggaagtacaaacactac
gacgtcacgccacgcaccgccatgatcatggctaacttaccgccagccggtactggccct
ggcccaaaaccggggaaacagccgacgatgccgacacaactgtccgtgtctgggccaacc
agctctgctctcccatccagtagtagtttcagcactatattccccaacaacccatacaca
gtgtcgttgaaggctggccaggcatccacaagagacagagaggagactaaggacaggcct
aactcttctgctggaggtggtggggagtccagaacatctaccaactcccccataaagttc
agacaaccaaggattctgcagcctccacccggaaccttctataagccttctggttattca
ggtgccagaggctggccatcattaagtacctctgggaccactagcctcaccaaaatgtcc
ccaacttctcccactgttaaagcctcttcccagacttctcctactgttaaagcctcttcc
cagacttctcctactgttaaaacctcttcccagacttctcttactgttaaaacctcttcc
cagacttctcctactgttaaaacctcttcccagacttctcctactgttaaaacctcttcc
cagacttctcctactgttaaaacctcttcccagacttctcctactgttacagcctcttcc
cagacttctcctactgttaaaacctcttcccagacttatcctactgttaaaacctcttcc
cagacttctcctactgttaaaacctcttcccagacttttcctactgttaaagcctcttcc
cagacttctcctactgttaaaaccttcccaacctcccctactgttaaaacctcttctcca
accgcccctactgttaaagcctcttcccagacttctcctactgttaaaaccttctcacca
acctcccctactgttaaaaccttctcaccaacctcccctactgttaaaacctttccaacc
tcccctactgttaaaaccttcccaacctcccctactgtcactgctcctctccccctctct
tcctcccaatcctccagcatgactttctcctcttctcctatggttaccaccaccacccca
tcccctactgccacctacatccttcaaacctcacacctccccacacacaccctacaggac
tctgtggacagctctgttagtgttgaccccgaggtcacgacctccgctgacttttccccc
cgccagtcccctccccccagcagcccagaggaccccagctcgaccgaggtcgtcccgctg
caacaaagactgagaccccggcccagacccggcgctcgcctgcaggagttagaacacaga
gaggcccattttgtctga
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