Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139387079
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Entry
139387079 CDS
T10872
Name
(RefSeq) chromobox protein homolog 3b isoform X1
KO
K11586
chromobox protein 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
139387079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139387079
03036 Chromosome and associated proteins [BR:
ocla03036
]
139387079
Spliceosome [BR:
ocla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
139387079
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
139387079
Heterochromatin formation proteins
HP1 (heterochromatin protein 1)
139387079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chromo_shadow
Chromo
Motif
Other DBs
NCBI-GeneID:
139387079
NCBI-ProteinID:
XP_070989169
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All DBs
Position
3:6843279..6851932
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AA seq
209 aa
AA seq
DB search
MRKKQNVKQRKAETIITPTPLTTTTLSTTTTAAAVVQEFVVEKIIHRRVFNGRVEYYLKW
KGFTDADNTWEPEDNLVCPELIEEFLRNLCLSGENQVEEENLRPVEPELVPKEELAEQET
EIQVYSEQRHNDLQEPADQDSPTALTCPLEPERIIGSTERHGELMFLIKWKNRDEVALLS
AREASARYPEVVVAFYEDKLTWHSGDEDQ
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaaagcagaatgtgaaacagagaaaggcagaaacaataataacaccaacacca
ttaacaacaacaacactatcaacaacaacaacagcagcagcagtcgtccaggagtttgtg
gttgagaagatcatccaccgaagggtcttcaatggaagagtagagtactatctgaagtgg
aaaggattcactgatgctgacaacacctgggaaccagaggacaacttggtctgtcctgaa
ctgatagaagagttcctgagaaacctctgtttgtctggagagaatcaggttgaggaagag
aacctacggccggtggaaccggagctcgtccccaaagaggaactggcagaacaggagact
gagattcaggtgtacagcgagcagagacataatgacctccaggaacctgctgaccaggat
tctcctactgccctcacgtgccccctggaacctgaacgcatcatcggctccacagaaaga
cacggagaactcatgttcctcatcaaatggaagaaccgtgacgaggtggccctgctgtca
gccagggaggccagcgccaggtatcctgaggtggttgtagccttctacgaggacaaactc
acctggcactctggggacgaggaccagtaa
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