Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139387151
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Entry
139387151 CDS
T10872
Name
(RefSeq) histone deacetylase complex subunit SAP130-like
KO
K19192
histone deacetylase complex subunit SAP130
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139387151
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
139387151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP130_C
Motif
Other DBs
NCBI-GeneID:
139387151
NCBI-ProteinID:
XP_070989287
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All DBs
Position
28:14326573..14348787
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AA seq
1051 aa
AA seq
DB search
MSSQQYPRPGILPGMGQNQTPGGNTALLSGSQPNTAGGADDRNRDPHPDHGPRDHPNSGG
GASTFRDDKQETVVVRPYPQAQVHGPPQGHPTPAGHLSLQQGMPVTVSAPPPHIPQGLPL
AFTEGPMKPALKSPMAGRVIAPAPANTQGHITLPPKVPSHVTATMESTVPQTAGIPVATI
SGQQGNPSNLHHHLMTTNVQIIRSHAPPLQLGSPGAPQHTFTSHLPRGAAAAAVMSSSKG
PTVLRPATGPGGGTGPPTVQHIIHQPIQSRPIVTTSTAVMPTVVAPLTATRPQSPVVSSA
THSAEMVHGRPGLNIHPPSATLSIQRQPTSRDNPTRITLPSHPAIGGQKPQLSHTMAQKP
IFSNVTPVAAATVAPILATNTAPSPSTTGSGPHPQMTNSNIVTMTMTSHSSHATAVTTSN
IPVAKVVPQPIAHTSPRIQPEYPGERGNLIPISGHRSSPNPITMEARNDNRQSVPVQFQY
FLPTYPSSPFPLTHTYTPITSSVSTIRQYPVTPQAPSGTAMQTQTSVGVASAVHLNPMQL
MTVDRIAQINTQNIQPAGMATQGIQPTTISAQGLHAATGQITAQNIQPAPINPQQPANEN
KTSIVLADGTTLVTNPIGQTFGGSQPPTSVGQTHPQNTGPGAPTLVSSPRPSILRKKPAN
EGSAVRKNLIPEANSPRIDGGIRHASGFPRPAGVKHKPDLHVSLAPAVMSSSMEALPSHQ
TNEHQQHPGAPPHQQPSQPIQTLLSVSAPPHSQPGPALSAITPPILSMANVVVPPTQSAA
SSTAACGISSTLPEIKIKQEVEAMDTSKPGPPMPHCGTPLLSMMPSGDVTPGASPRKKPR
KQQHVISTEESEMMETNSTDEEKVLARPLSMRAEKRKSPLKEYIDEEGVRYVPTRARPPV
TLLRHYRNPWKAAYHHFQRYSDIRVKEEKKGTLQDVANQKGVVCRAQGWKMHLCAAQLMQ
LTNLEHDVYSRLTTLQEGLIPKKKAGSDDDLHRINELIQGNMQRCKLVMDQITEARDTMM
KVLDHKEKVMKLINKNGGAKKVNKLKRKDKA
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcaacaatatccacggccgggaatacttcctggtatgggacaaaaccagact
cctggaggaaacactgcattgctgtctggtagtcaaccaaacacggcaggaggggcagac
gataggaaccgtgaccctcacccagaccacggtcctcgtgaccaccccaacagtggtggt
ggagcatcgaccttcagggacgacaagcaggagacagtggtggtccggccttacccccaa
gctcaggtccatggacccccccagggtcaccccactccagcaggtcacctgtcactccag
cagggcatgcctgtcacagtgtcagcccctcctccacacatcccccagggcctgcctctg
gcattcactgaaggacccatgaagccagctctgaagtcgcccatggccggtcgagtgatc
gccccagcaccagccaacacccagggccacatcaccctgccacctaaggtgccaagccac
gtcactgcaaccatggagagcaccgtgcctcagaccgctggcatccctgtagcaactatc
agtggccaacagggcaaccccagtaacctgcaccatcacctgatgacgaccaatgtgcag
atcattcgcagccatgcaccgcccctgcagctcggctcccctggagccccccagcacacc
ttcacctcccatctacccagaggagctgctgcagctgctgtgatgtccagttccaaagga
cccacagtactgagacctgctactggccccggtggtggcactggcccacctactgtccag
cacatcatccaccagcccatccagtcccgccctatagtcacaacgtccacagctgtgatg
cccacggtggttgccccattaacggccaccaggcctcagtccccagtggttagctcagcc
acgcactccgcagagatggttcatgggcgtccaggactaaatatccacccgccttcagcc
actctgagcattcagcgtcaacccacatctcgggacaaccccacacgcatcaccctgccc
tcccaccctgccattgggggtcagaaaccccagctgtcccacaccatggcacagaagccc
atattcagcaatgtgactcctgtcgctgctgcaactgttgcccccatattagccaccaat
actgctccatcgcctagcactacaggctccggaccccacccccaaatgaccaacagtaac
atcgtcaccatgacgatgacttctcattcctcccacgccacagcagtcaccacgtccaac
atccccgtggctaaagtggttccccaaccgatagcccacacctcgcccaggatccagccg
gagtaccccggagagaggggaaacctgatccccatctctggtcaccgctcctcccccaac
cccatcaccatggaggcccgcaatgacaacaggcaatcggtgccagtgcagttccagtac
ttcctgcctacctacccttcttcaccgttccccctgacacacacctacacccccatcacc
agctctgtgtccaccatccgacagtacccagtaacccctcaggcccccagcggcacggcc
atgcagacccagacgagtgtgggcgtggcgtcggcggtgcacctcaaccccatgcagctg
atgacggtggaccgcatcgctcagatcaacacacagaacatccagcctgccggcatggcc
acgcagggcatccagccaaccaccatcagcgcccagggcttgcacgccgccaccggtcag
atcaccgcacaaaacatccaaccggcacccatcaacccacaacagccagccaatgagaac
aagacctctattgtgttagcagacggcaccactctggtaaccaaccccatcggccagacg
ttcggcggcagccagcctcccacctctgtgggtcagacacaccctcaaaacactgggcct
ggtgcccccaccctggtgtcctctccccgacctagcatcctacgtaagaagcctgccaac
gagggctctgcagtgaggaagaacctgatcccagaggccaacagccccaggatagacgga
ggaatcaggcatgcatcagggtttccacgcccagcaggtgtgaaacacaagcctgatctc
cacgtgtccctggctcccgcggtgatgtcatcatccatggaggctctgcccagccatcag
accaatgaacaccagcagcatcccggagccccgccccaccagcaaccctctcagccaatc
cagacgctcctctcagtgtcagcacccccacactcacagcctggccccgccctgtccgcc
atcactccaccaatcttgtctatggccaacgtggttgttccgcctacccagtcagcggcc
agtagcacggcggcatgtggaataagctccaccctccctgagatcaagataaagcaggag
gtggaggccatggatacctccaaaccaggtccccccatgccccattgtggtacccccttg
ttgtccatgatgcccagtggggatgtgacccccggggcctcacccaggaagaagccccgg
aagcagcagcatgtcatctctacggaagagagcgagatgatggagaccaacagcacggac
gaggagaaggtcctagccagacccctcagcatgagggccgagaaacgcaagtcgcccctc
aaggagtacatagatgaggaaggggtgcgttatgtccccacccgtgctcgccccccggtc
acactcctccgccactacaggaacccctggaaggctgcctatcaccacttccagagatac
agtgacatccgggtcaaagaggagaagaagggcaccctgcaggacgtagccaatcagaaa
ggggtggtgtgcagagcgcagggctggaagatgcacctgtgtgctgcacagctcatgcag
ctgactaatctggagcatgacgtgtacagccgcctcacgaccctccaagagggtctgatc
ccaaagaagaaggccgggtcggatgatgacctgcaccgtatcaatgagctcatacagggt
aacatgcagcgctgtaagctggtgatggaccagatcactgaggctagagacaccatgatg
aaggtgctggaccacaaggagaaagtcatgaagctaatcaacaagaacggtggagccaag
aaagtcaacaagctgaagcgcaaggacaaagcctag
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