Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139387254
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Entry
139387254 CDS
T10872
Name
(RefSeq) methyl-CpG-binding domain protein 3a
KO
K11591
methyl-CpG-binding domain protein 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139387254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139387254
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
139387254
Chromatin remodeling factors
NuRD complex
139387254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBDa
MBD_C
Pardaxin
Gp5_trimer_C
Methyltransf_10
Motif
Other DBs
NCBI-GeneID:
139387254
NCBI-ProteinID:
XP_070989466
LinkDB
All DBs
Position
28:complement(36061961..36063173)
Genome browser
AA seq
187 aa
AA seq
DB search
MLMNKRQRNRHKHRYDNNHQIKVKPDLNTTLPVRQTASIFKQPVTKVTNHPSNKVKTDPH
KAVDQPRQLFWERKLSGLSAFEIAEELVKTMDLPRGLQGVGPVCSDKTLLSAISSALHTS
PNPVTGQLNAAVEKNPGVWLNTAQPLCKAFMVTDDDVRKQEDLVHNVRRLEEHSDGGHVG
SHRGIHQ
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgctcatgaataagcgtcaaaggaaccggcacaagcatcgctatgacaacaaccatcag
atcaaggttaagccggacctgaacacgaccttaccagtcagacagacagcatctatcttt
aaacagcctgtcaccaaggtgaccaatcaccctagcaacaaagtaaagacagacccccac
aaggctgtcgaccaaccaagacagctgttttgggagaggaagctgagtggtctgagtgct
tttgaaattgcagaagagctggtgaaaaccatggaccttcccaggggcctacagggtgtt
gggcctgtgtgttcagacaagaccttgctctcagcaatctccagcgccctacacaccagc
cccaaccctgtcactggtcagctgaacgcagctgtggagaagaaccctggggtatggctc
aacaccgcccagccgctctgcaaggccttcatggttaccgatgacgacgtccggaagcag
gaggacctggtccacaatgtgaggaggctggaggaacactctgatggcggacatgttggt
tcacatagaggaatccaccaataa
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