Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139387271
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Entry
139387271 CDS
T10872
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like
KO
K09299
zinc finger homeobox protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139387271
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
139387271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
Homeodomain
zf-C2H2_15
zf-Di19
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
139387271
NCBI-ProteinID:
XP_070989485
LinkDB
All DBs
Position
28:complement(39373099..39466581)
Genome browser
AA seq
1403 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNNVVEAQSDSDDEDKLHIVEEDPDGDSTVPEDTSAVL
SQNGTETHQDTWDGVKEECGSEEEDEEEEEEEEEEGGKEMIQQGDTAVIYPKAPVGKQKS
ASERGVSEKTGTPDTLSQLLTCPYCSRGYKRCTALKDHIKLRHEKSEDNFSCSQCSYTFT
YRTQLDCHMTQHKNQHKDPVQRHVPQTTTTTITTGGNRKFKCTECSKAFKYKHHLKEHLR
IHSGEKPYECPNCKKRFSHSGSYSSHISSKKCVGMVPVNGNPSPVIKVSNQTPSQTQPSG
PAAAPVRVLLRGEKTDSKPLQEQLPHTQIKSEPVDYEFKPVVVAPNGAVGTNGTVFNGGV
ALPQGTALPQGMVQAVVLPAMGLMSPITINLSDLQNMLKVALDGNVLRQVLGTANGLVTS
KQGFVTQAGQQVISAISLPGFVDQDGTTKIIINYSLEPSPAQQPTAPQLLKQEAPPPTTN
TNTASATNTQPASKVTEKLPQDLHINKTEPDDSEHESEMETQEAETEAETPKAQTGKTRC
LLCDNCPGDLDALHMLQHCKPANGEGGDSATFDPSIATLLAEAGITPGQHPLKNLLSLLK
AYFALNAEPTEEELAKISDNVSLPVDVVKKWFEKMRSGQITVGPPGSSPDDSGLSDSSTE
TQLDQEKSGTEIEEQHASAQTQETSSSQPPNSSPASTSPSVSASAPSPLNLSSSGLVIVK
TEVDSEREAQDLPLDLSLPKQPQSQPQVPHVPQEQPLNLTCLKEKVQAQLPGLQGTTNTI
YVTSSPQTTIPSPVNIMTTRLVAITNQGSGVPCLRAISTGTTKRTILIPQLTYTYTTTAC
SGTTGTDGAQKTVRINGCQEEKSASSSEGVATVEEQDNSDSSPPLKKMRRLQSGMYSCDL
CDKIFQKSSSLLRHKYEHTGKRPHECGICDKAFKHKHHLIEHTRLHSGEKPYRCDKCGKC
FSHSGSYSQHMNHRYSYCKKEPQGGRQGGRQLGMSPERSPQTEEQQSDSRPTSPPSQLDS
DERESEEELEEEEGMAAMSMDDIRVVQVGEDDEESEIYEVEEFEEERQEEEEGSREEEEE
EEEIREEEEEEIREEEEEESRGEEVEKEGSKEEEEQKEESREEEVQQKQVCEEEQEEEGM
REEEAHQEEVEEEEGSREEEAHQEEEEEGSREEEAHQEEEEEGSREESAHQEEVEEEEGM
REESAHQEEVEEEEGRREEEAHQEEEGSREEEAHQEEEEEGSREEEAHQEEEEEGRREEE
AHQEEVEEEEGRREEEAHQEEEEEGSREEEAHQEEVEEKEGMREEEALQEEEEEGMREEE
EICKEESLQQEDVCEEEEVMAVQVMGGVEEEEEEEGVAEKETFVTEEAMETEDKEPHVDK
EDIPVEGLETGQRETEEDKMNGE
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaacccgaggaggaataacgta
acgaattacaacaacgttgtggaggcccagtcagattctgacgatgaggacaagctacac
atagtggaggaagaccctgatggagacagcactgtgccagaagacacctccgcagtatta
tcccagaacgggacggagacgcaccaagacacctgggatggagtgaaggaggagtgtggc
tcagaagaggaggatgaggaggaggaggaggaggaggaagaggaggggggtaaggagatg
atccagcagggagacacagcggtcatctaccccaaggcgccggtcggcaaacagaagagc
gcgtctgagagaggggtctcagagaagaccggcacgccagacaccctctcccagctcctg
acttgtccctactgctcgcgaggctacaagcgctgcacggccctgaaggaccacatcaag
ctacgtcacgagaagagcgaggacaacttcagctgctcccagtgcagctacaccttcacc
taccggacacaactggactgtcatatgacccaacacaagaaccaacacaaggatcctgta
cagcgtcatgtaccccagaccaccaccacaacaataacaacaggggggaacaggaagttc
aagtgtactgagtgttccaaggcttttaaatataagcaccacctgaaggagcatcttcgc
atccacagcggagagaagccatacgagtgccccaactgtaagaagaggttttcccactca
gggtcctacagttcccacatcagcagtaagaagtgtgttggcatggtgcctgtcaacggc
aaccccagcccagtcattaaggtctccaaccagacccccagccagacccagccctctggc
cccgccgcagccccagtccgagtgctcctccggggggagaagacagacagcaagcccctg
caggagcagctcccccacactcagattaaatctgaacctgtggattatgagttcaagccg
gtggtggtggcacctaacggggcggtggggactaacgggacggtgtttaacggtggcgtg
gcgctaccccagggcacggcgctgcctcagggcatggtccaggcggtggtactgcccgcc
atgggtctgatgtctcctatcactattaacctcagcgacctgcagaacatgctcaaggtg
gccttggatggaaacgtgctgcgtcaggtgttggggacggccaacgggctggtgacctcc
aagcaggggtttgtgacacaggctggccagcaggtaatctcagccatcagcctgcctggc
ttcgtggaccaagacggtaccaccaagatcatcattaactacagcctggagcccagcccg
gcccagcagcccaccgcccctcagctcctcaagcaggaggctccccctcccaccaccaac
accaacaccgccagcgccacaaacacacagcccgcctccaaagtaacagagaaactcccc
caggacctccacatcaacaagaccgagccggacgactcggagcacgagtcagagatggag
acgcaggaggcagagactgaagctgagacaccaaaggcccagacaggcaagacaaggtgt
ctactgtgtgacaactgtcctggtgatttggatgcactgcacatgctccagcattgtaaa
cctgccaatggggagggaggtgacagcgccaccttcgacccctccatcgccaccctcctg
gccgaggcagggataacaccaggccagcatcctctaaagaatctgctctcactcctcaag
gcctacttcgccttaaacgccgagcccaccgaggaagagctggccaagatctctgacaat
gtcagcctgcccgtggacgtggtcaagaagtggtttgagaaaatgcggtcaggtcagatc
acagtcggaccccctggttcctctccagatgactctggactttcagattccagcacagag
acccagctagaccaagagaagagcggcacagagatagaggagcagcatgcctcagcccaa
acacaggagacatcatcttcccaacctcctaacagttcccctgcctcgacgtccccctct
gtctcagcctcggccccctcaccactaaacctctcctccagcggcctggtcatcgtgaag
actgaggtcgactctgagcgcgaggctcaagatcttcccctggacctgtcccttcctaag
cagccccagtcacagccccaggtcccccatgttccacaggagcagcccctcaacctcacc
tgcctgaaggagaaagtccaggcccagctcccaggactccagggaaccaccaacaccatc
tacgtcacctcctccccccaaacgaccatccccagcccggtgaacataatgaccacccgg
ctagtagccatcaccaaccagggcagcggtgtgccctgcctcagggccatctccaccggc
accaccaaacggaccatcctcatcccccaactcacctacacatacaccactacagcatgc
agcggcaccactgggaccgacggagcccagaagaccgtcagaatcaacggctgccaggag
gagaagtctgccagcagctcagagggtgtggcgacggtagaggagcaggataactcagac
tcttcccctccgctgaagaagatgcgtcggctgcagagcgggatgtactcctgtgacctg
tgtgacaagatcttccagaagagcagctccctgctcaggcataaatacgaacacacagga
aaacggccacatgagtgcggcatctgcgacaaagccttcaaacacaagcaccacttgata
gaacacacgcgactgcactccggagagaagccctaccgctgtgacaaatgtggcaagtgt
ttctcccactctggctcctacagccagcacatgaatcaccgatactcctactgcaagaag
gagccccagggagggcggcaggggggacgtcagctcgggatgagccccgaaaggagtcct
caaacagaagagcagcagtcagacagccgacccacctccccaccttcccaactggactca
gacgagagggagagtgaggaggagctggaagaagaggagggcatggcggccatgagcatg
gacgacatacgggtggtgcaagtgggtgaggatgacgaggagagtgagatctacgaggtg
gaggagtttgaggaggagaggcaagaggaggaggaagggagcagagaggaagaggaggag
gaggaagagatcagagaggaggaggaggaagagatcagagaggaagaggaggaagagagc
cgaggggaagaggtggagaaggaagggagcaaagaggaagaggagcagaaggaagagagt
agagaggaggaggtacagcagaagcaggtgtgtgaagaagagcaggaagaggaagggatg
agagaagaggaggcacaccaggaggaggtggaggaagaggaagggagtagagaggaggag
gcacaccaggaggaggaagaggaagggagtagagaggaggaggcacaccaggaggaggaa
gaggaagggagtagagaggagtcggcacaccaggaggaggtggaggaagaggaagggatg
agagaggagtcggcacaccaggaggaggtggaggaagaggaagggaggagagaggaggag
gcacaccaggaggaggaagggagtagagaggaggaggcacaccaggaggaggaagaggaa
gggagtagagaggaggaggcacaccaggaggaggaagaggaagggagaagagaggaggag
gcacaccaggaggaggtggaggaagaggaagggaggagagaggaggaggcacaccaggag
gaggaagaggaagggagtagagaggaggaggcacaccaggaggaggtggaggaaaaggaa
gggatgagagaggaggaggcactccaggaggaggaagaggaagggatgagagaagaggag
gagatttgtaaagaagagtccctacagcaggaggatgtgtgtgaggaagaggaggtgatg
gcggtacaggtgatgggaggtgtagaggaggaagaggaggaggaaggagtggcagagaag
gaaacctttgtaacagaggaagctatggaaacggaggacaaagaaccgcatgtggacaag
gaggacatcccggtggaggggttggaaactggacagagagaaacagaggaagacaagatg
aacggtgaatga
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