Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139387323
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Entry
139387323 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase MARCHF6-like isoform X1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139387323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139387323
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139387323
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
139387323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
Motif
Other DBs
NCBI-GeneID:
139387323
NCBI-ProteinID:
XP_070989548
LinkDB
All DBs
Position
28:23494156..23509253
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AA seq
917 aa
AA seq
DB search
MDTAEEGDICRVCRSEGTPDKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRF
AFTPIYSPDMPSRLPVQDIFAGLLTSVGTAIRYWFHYTLVAFAWLGVVPLTACRIYKCLF
TGSVSSLLTLPLDMLSTENLLADCLQGCFVVTCTLCAFISLVWLREQIVHGGAPQWLEQN
QQQPQHAPAPQPNEQAPAPGQGAAENQPAAAELPADNGPAAEVPDIQMDPAEDMELEDEA
GAEDVADANNGAQDDMNWNALEWDRAAEELTWERMLGLDGSLVFLEHVFWVVSLNTLFIL
VFAFCPYHIGHFTVVGLGFEKNVRASHFEGLITTIVGYILLAMLLILCHGLAALVRFQRS
RHLLGVCYIVVKVSLLVVVEIGVFPLICGWWLDICSLEMFDASLKDRELSFDSAPGTTMF
LHWLVGMVYVFYFASFILLLREVLRPGVLWFLRNLNDPDFNPVQEMIHLPIYRHLRRFIL
SVVVFGSIVLLMLWLPIRTIKLILPAFLPYNVMLYSDAPVSELSLELLLLQVVLPALLEQ
GHTRQWLKGLVRAWTVTAGYLLDLHSYLLGDQEENDDDADQQANNNQQRRNNNNAIPEGL
HAAHQAILQQGGPVGVQPYHRPMKFTFRIVLLIVFMCVTLLVASLACLTLPVFTGRYLMS
FWTGSAKIHELYTAACGLYVCWLSIRVITVLLSWMPQGRRAILLKVQEWTLMVMLCNTIL
KTVVVAVLLAGAIPLLLGLLFEMVIVAPLRVPLDQTPLFYPWQDWALGVLHAKIIAAITL
MGPQWWLKTVIEQVYANGIRNIDLHFIIRKLAAPVICVLLVSLCVPYVISAGIVPIIAQY
SPGVTMEMQNLVQRRIYPFLLMVVMLLGILSFQIRQFKRLYEHIKNDKYLVGQRLVNYER
KAAGRSSTATHSSSSQE
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgccgaggaaggggatatatgccgggtctgccggtctgaaggaaccccggac
aagccactatatcacccgtgtgtttgcacaggaagtataaaattcatccaccaagaatgc
ttggtacaatggttaaaacacagcagaaaagaatactgcgagttatgcaaacacagattt
gcttttacaccaatctattctccagacatgccttcccggctgcctgtccaggacatattt
gcggggttgctgacgagtgtaggcacagctattagatactggtttcactacacactagtg
gcttttgcttggctgggagtggttcctctcacagcatgtcgcatctacaagtgtctgttt
accggctctgtgagctcactcctcaccctgccattagatatgctttctacggagaacttg
ctggcggactgcttgcagggttgtttcgtggtgacgtgtacactctgcgccttcatcagt
ctggtgtggctgcgggagcagattgttcacggtggcgccccccagtggctggagcagaat
cagcagcagcctcaacatgcaccagctccacaacctaatgagcaggcccctgcccctggg
cagggggcagctgaaaaccagcctgctgcagctgagctcccggcggacaatggtccagcg
gctgaggtccccgacatccagatggacccggcagaggatatggagctggaggacgaggct
ggggctgaggatgtagcggatgccaacaatggagcacaagatgacatgaattggaatgcc
ctggaatgggatcgggcagcagaggagctaacatgggagagaatgctcggtcttgatggc
tccttggttttcctggagcatgtcttctgggtggtctcactaaacacactcttcattctg
gtgttcgctttctgcccgtatcatattggtcatttcacagttgtgggacttggctttgag
aaaaatgtgcgggcttcccatttcgaaggcctcatcaccaccatcgtgggctacatcctc
ctggccatgctattaatactgtgccatggattggcagcgctggtgagatttcaaagatcc
agacaccttttaggagtgtgctacattgttgtcaaggtatccctgctggtagtcgtggag
atcggtgtattccctctcatctgtggctggtggctcgacatctgctcactggagatgttt
gatgcctctctgaaggacagagagctgagttttgactctgctcccggcaccaccatgttc
ctccactggcttgtagggatggtctacgtcttctactttgcctcgttcatcctcttactg
cgagaggtgctgagacccggtgttttatggtttctcagaaacctgaacgatcctgatttt
aatcctgttcaagaaatgattcacctgccaatatacagacatctcagaagattcatttta
tcggtggtggtgtttggctccatagttttgctaatgttgtggcttcccataaggacaatc
aaactcatccttccagccttcctcccatacaatgttatgctgtacagtgatgctccagtc
agtgagctgtctctagagctgctgctgctgcaggtggttctgcctgcgctgctggaacag
ggtcacacacgccagtggctcaaaggcctggtcagagcctggaccgtcaccgccggatac
ctgctagacctccactcgtacctgttgggtgaccaggaggagaatgacgatgatgcagac
cagcaggccaataacaaccagcagaggaggaataacaacaacgccatccctgagggactg
cacgctgcccaccaggctatcctccagcagggaggccctgtgggtgtccagccctaccac
cggcccatgaagttcacctttaggattgtgctcctgatcgtgttcatgtgtgtgacactg
ctggtggccagtctggcgtgccttacgttgccagtattcaccggccggtacctgatgtcc
ttctggacgggcagtgctaagatccacgagctgtacacggcagcgtgcggcctatacgtg
tgctggctgtctatcagggtcatcaccgtgctgctgtcctggatgccccagggcaggagg
gccattctactcaaggtccaggagtggaccctcatggtaatgctctgcaacacgatcctg
aagaccgtggtcgtagctgtgttgctggctggcgccatccctctcctgctgggtttgctg
tttgagatggtcatagtagcccctctaagggtgccgctggaccagacaccactcttctac
ccctggcaggactgggctctcggagtgctccatgccaaaatcattgccgccattactctg
atgggtccccagtggtggctgaaaacagtgatcgagcaggtgtacgctaatggcattcgc
aacattgatctccatttcatcatccgtaagctggctgctccggttatctgtgtgctactg
gtgtctctctgtgtgccctatgtcatctctgctggcatcgtccccatcatagctcagtat
tccccaggagttaccatggagatgcagaatttggtgcagaggagaatctacccgttcctg
ctcatggtcgtcatgctgctgggaatcctctccttccaaatccgtcaatttaagcgcctt
tacgaacacattaagaatgacaagtacctggttggacagagactggtgaactatgaacgc
aaggcggcaggcagaagcagtacagccacacacagcagctcttcccaggagtag
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