Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139387376
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Entry
139387376 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase RNF31 isoform X1
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04217
Necroptosis
ocla04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
139387376
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
139387376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139387376
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
139387376
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
139387376
Multi subunit type E3
LUBAC complex
139387376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_HOIP
E3_UbLigase_RBR
IBR_1
IBR
PUB
Zn_ribbon_RanBP
UBA
Motif
Other DBs
NCBI-GeneID:
139387376
NCBI-ProteinID:
XP_070989614
LinkDB
All DBs
Position
28:complement(22408857..22418779)
Genome browser
AA seq
1080 aa
AA seq
DB search
MASTLSDQLEEVRCHAEACLYSTGSVLEVRAGISAMANIPLPPSAKYRYIAAETMIIENG
VNNNRKETIGSLQRLSTALNILEKYGCNLTSSSRPKYWRAVKHNNPVFRATVDAIQGGRA
VLCLYGYSNQQPDGLSFPDEVVEPDIEKVAAVTLEVMSLRMELDMLIKEAHPHPEFFERI
IPSLNQKDDFEPISDAVAIPSSLRESQPLYMSLASLSQSPTSAFLPVRTANASTSTSIST
RHTDNCTICAIFPVAAHCNSCVQWLCTECDRLYHSSAERANHHRTVVTSSKMRKNHSSSL
LSWHCTHCTRVNSNQDILCETCERPRLASSGSAKDEFPQPFTITEWQCKSCTVVNAGSSI
LCEVCERPRLATKPPATPTRPTPTPNRPAAPVLGMPGDPDSQWMCQFCTYINYTPASVCE
MCDLPRPEPTKMRVKLHPPSQVKKVPVLSVKPKDPPMEDPDLRRQKLMREEGLKLIQLIR
DGEKKGVSPEEVYTGMRVSGDGNILPCDWLKAELPHLLDQICATAISSRAADLKAGQNQN
GTGTAEDTGVEEGEGEQTRGGGVTLSRAEAKLAWLSAGGDTERAAKQALRDRHSKVKELC
SLGFTDEVRCQEVLRQSEGEVRGALSLLQRPLMEPFHQRMWSDQPEPPIDINHPDKQRVC
RRLLAVYDLPSWGRCELALSLLQERTAPYSLDDVVQAVRESHDRDFIRRVLAKECPICLS
EFPHSKMQSLTSCQCSVCCGCFQQHFTIAVRDKHIRDMVCPVCWEPDINDPEHLNSYFST
LDIQLRECLEAEVYDLFHKKLTEQALIKDPKFLWCSHCSYGFIYDGDQLKVTCFQCRNSF
CAQCKKPWESQHGGLSCERYQSWKRENDPEYQRQGLAGYLRDNGITCPNCRFQYALSKGG
CMHFSCSQCRYQFCSGCNNPFHTTCAVIHCSVTGLHAHHPRDCLFYLRDWEPGRLQALLQ
NKGVEFNTDTPPGTQAGLCGVIEQKDESGQQTDSACGAQTQPGHAGLCEKHYREYLVSLI
NSHSIDPAPLFNANELVLACRRYQVDDARGELEDDVTYYTRILEKLIDEVPLGDKVPRKK
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggctagtaccctttcagaccagctagaggaggtacgatgccatgcggaagcttgtctg
tattccactggctcagtgctggaggtccgtgcaggaatatcagctatggccaacataccc
ttaccaccatcggccaaataccgctacattgctgcggagaccatgataattgaaaacggc
gtcaataacaacaggaaagaaacaataggttccctgcagagattgtccacagcactgaac
attctggagaagtatggctgtaacctcactagctccagtaggcccaagtactggcgcgct
gtcaagcacaacaacccagtcttcagagcaacagtagatgccattcagggaggaagggca
gtgctttgtctctatggttactccaatcagcagccagacggcctgagtttccctgatgag
gtcgtggaacctgacattgagaaggtcgcagcggtcaccttggaggtcatgagtctacgc
atggaactggacatgctcatcaaggaggctcacccccacccagagttctttgagagaatt
atcccatcactgaaccaaaaggatgacttcgaacccatttctgatgcggtagctattccc
tccagcctcagagagagccagcccctgtacatgtctctggcctccctgtctcagtctccc
actagtgcctttcttccagtacggaccgctaacgcctcaacctccacctctatctctacc
agacacacagacaactgcactatctgtgctatattcccagtggctgcccactgtaactct
tgtgtccaatggctgtgtactgaatgtgatagactgtaccactcctctgcagaacgagcc
aatcaccacaggactgttgtgacatcctctaaaatgcgaaagaaccacagcagctccctc
ctgtcatggcactgtacccactgcaccagggtcaactccaaccaggacatactgtgtgag
acatgtgagagaccacgcctggcctcctctggctctgctaaggatgagttcccacagccc
ttcaccatcactgagtggcagtgtaaaagctgtacggtggtgaacgcgggcagtagtatc
ctgtgtgaggtgtgtgagcgcccccgcctggccaccaagcctccggcaacccccacacgc
cccactcctacacccaaccggcctgctgctccggtactgggaatgccaggagacccagac
agccagtggatgtgtcagttctgtacttacatcaattacactccagcgtcagtgtgtgag
atgtgtgacctcccccgccccgagcccaccaaaatgcgagtcaaactccaccctccgtcc
caggtcaaaaaggtccctgtgctgtccgtcaaacccaaagacccgcccatggaggaccct
gatttgaggagacagaaactgatgagggaggaggggctaaagctgatccagctcattaga
gatggagagaagaaaggagtgagtccagaggaggtgtacacaggcatgcgcgtctccggg
gacggaaacatccttccctgtgattggctcaaagcggagctacctcacttgctcgaccag
atctgtgccacggccatttcgtctcgagcggcagacctgaaggccggacagaaccagaat
ggtactggtactgcagaggatacaggtgtggaggagggggagggggagcagacgagaggg
ggaggagtgacactgtccagggctgaggccaagctggcctggctgtctgcagggggagac
actgagagagcagcgaaacaggctctcagagacagacactctaaggtaaaggagctgtgt
tctctggggttcactgacgaggtgcggtgtcaggaggttctgaggcagagcgagggagag
gtgcggggggctctgtctctgctgcagcgacctctcatggagcccttccaccaacgcatg
tggagcgaccaacctgagccacccatcgacataaaccaccccgacaaacagcgtgtgtgc
cggaggctgctggcggtgtatgacctgcccagctggggccgctgtgagctggccctgtcc
ctgctgcaggagcgtaccgccccctactccctagacgacgtggtacaggccgtacgcgag
tcacatgaccgagacttcatccgccgggtgctggccaaagagtgccccatctgcctgtca
gaatttccccacagcaagatgcagtctctgacctcctgtcagtgctcggtttgctgtggc
tgtttccagcagcacttcactatcgcagtgagagacaagcacatcagagacatggtgtgt
cccgtctgctgggaacctgacatcaacgaccccgaacacctcaacagctacttctccacc
ctggacatccagctgcgggagtgtctggaggcggaagtgtatgatctgtttcataagaag
ctgactgaacaagccctcatcaaggaccccaagttcctctggtgtagtcattgctcctat
gggttcatctatgatggagaccaactgaaggtcacctgtttccagtgcaggaacagcttc
tgcgcacaatgcaagaaaccttgggagtctcagcacggtggtctgtcgtgtgaacggtac
cagtcctggaagagagagaatgacccagagtaccagaggcaaggcctggccggatacctg
cgtgacaacggcatcacatgtccaaactgcaggttccagtatgccctgtccaaaggaggc
tgtatgcacttcagctgctcccagtgcaggtaccagttctgcagcggatgcaacaatccc
ttccacactacttgtgcagtgatccattgtagtgtgacaggcctgcatgcccatcaccct
cgagactgtctcttctacctgagggactgggagcctggcagactacaagccctgctgcag
aacaagggtgttgagttcaatacggacacccctccaggaactcaagcaggactgtgcgga
gtgatagagcagaaggatgagagtgggcagcagacggactcggcctgtggggctcaaact
cagcctggccatgcaggactgtgcgagaaacactacagagagtacttggtgagcctcatc
aatagccattccatcgacccggcccctctcttcaacgccaacgagctggtgctggcctgt
cggagataccaagtggatgacgcccggggggagctggaggacgatgtgacgtactatact
cgaatactggagaaacttattgatgaagtaccacttggagacaaggttccacggaagaaa
tga
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