Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139387863
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Entry
139387863 CDS
T10872
Name
(RefSeq) AP-3 complex subunit beta-1-like isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
139387863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139387863
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Others
AP-3 complex
139387863
Endosome - Golgi transport
139387863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
AP3B1_C_2
Cnd1
HEAT_2
INTS1_R4
MOR2-PAG1_C
Motif
Other DBs
NCBI-GeneID:
139387863
NCBI-ProteinID:
XP_070990264
LinkDB
All DBs
Position
29:complement(6615248..6676832)
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AA seq
1108 aa
AA seq
DB search
MLSMSTNNLSYNDQGGSDSAVEVGQETTPTSSNAGAGFGLFSTNFKKNDDLKEMLESNKD
SLKLDAMKRIIALIAKGKNASELFPAVVKNVASKNIELKKLVYVYLVRYAEEQQDLALLS
ISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTSAHAIQK
LYSLDPDQKEHLIEVIDKLLKDKSTLVAGSVVMAFEEVCPDRIDLIHKNYRKLCNLLVDV
EEWGQVVIITMLTRYARTQFTSPWKEDGLFEENSETAFYESDEKKTKNGDEKKSYMMDPD
HRLLLRNTKPLLQSRNTAVVVSVAQLYWHLAPKHEVGVITKSLVRLLRSHREVQYVVLQN
IATMSIQRKGMFEPYMKSFYVRSTDATHIKSLKLEILTSLANEANISTILREFQTYVKSQ
DKQFAAGTIQAIGRCATNISEVTDTCLQGLVLLLSNRDETVVAESVVVIKKLLQTQPTQH
SDIIKHMAKLFDNIAVPMARASILWLMGEYCERVPQIAPDVLRKMAKSFTSEEDIVKLQT
VNLAAKLYLTNSKQTKLLTQYILNLGKYDQNYDIRDRTRFIRQLIVPNEKSGALGKYARR
ILLAPKPAPVLESTYKDRDRYQLGTLSHTINTKASGYLELSDWPAVAPDQSVRNVEVIEP
VKEWAPSLGKTGKSKLSKSSDDKFYSDSGEEKEKGSGSSSSDDSSSSSEESSSEAESDEE
KSSSQSSEESDKSSSQSEKSSSESDSEQKKTTKKPPQKKTVKPTAKDSDSDENGNVAKET
SSSSAEETSSGSESGSDADSHSGTERKKKTKSKAKPKMEVKSTKEVSLLKEVSLLDLDDF
TPTPVTRPKMSVLSPSLLGDLEGLSLSNISSTIQVSGPAFVPEKSHDLLHRMTGKGLSAQ
YQFPRQPCLYQPTMVSVQISLTNTTDHPLEQIHIGDRDPTGLDMHCFNAIECLLPEASVT
VSLGVDFNDSTQAANFQLCTKEDQFSVSIQPAVGELFLPATMTEQDFRKEQGKLLGMNES
SATITMAAENTTRQPISRQVATVANLGVVPSGQDNIHRFAGKTASSGALVLVTVELRELS
AALITINTEKSVMGPMLLRDLKRALAWA
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgttgagcatgtcgacgaacaacttgtcgtacaacgaccaaggaggatcggattcagcg
gtggaggttggtcaggagactaccccgacctcctccaatgctggagctggatttggcctg
ttcagcaccaactttaaaaagaatgatgaccttaaagagatgctggagagcaataaggac
tcactcaaactggacgccatgaagaggatcattgcgctgatcgccaaggggaagaatgcc
tccgagctgttcccagctgtggtgaagaacgtggccagtaagaacatagagctgaagaag
ttggtgtatgtgtacctggtgaggtatgcagaggagcagcaggacctggctctactgtcc
atcagcacctttcagagggccctcaaggaccctaaccagctgatcagagccagtgctctg
agggttctgtccagtatcagagtccccatcatcgttcccatcatgatgctggccatcaag
gaggctgcctccgacatgtccccttacgtcaggaaaacatccgcccacgccatccagaaa
ctctacagcctggatccggatcagaaggagcacctgatagaagtcattgataaattgctg
aaggacaaaagcactctggtagcgggcagcgtggtgatggcctttgaggaggtgtgtcca
gaccgtattgacctgatccataagaactaccgtaaactctgcaacctgctggtggacgtg
gaggagtggggtcaggtggtcatcataaccatgttgacccgctacgccaggacgcagttc
accagcccctggaaagaggacggtctgtttgaagagaacagtgagacggcgttctatgag
tctgatgagaagaagacgaaaaatggggacgaaaagaagtcctacatgatggaccccgac
cacagactgcttctgaggaacaccaagcctctactacagagtagaaacactgccgtggtg
gtgtcagtagctcagctgtactggcacctggctcctaaacacgaggtcggcgtcatcacc
aagtcactggtcagactgctccgaagccacagagaggtgcagtacgttgtgttacagaac
atagccaccatgtctatccagaggaagggcatgtttgaaccttacatgaagagtttctat
gtgagatccacagatgccactcacatcaaatcgctcaagctggagatcttgaccagcctg
gccaacgaagccaacatctcaaccatccttagagagttccagacttatgtgaagagccaa
gacaagcagtttgcagccggtaccatccaggccatcggcaggtgtgccaccaacatctct
gaggtgacagacacctgcctccaaggactggtgctgctgctctccaaccgagacgagacg
gtggtggctgagagcgtggtggtcatcaagaagcttctccagacccagcccacccagcac
agtgacatcatcaaacacatggccaagctcttcgacaacatcgctgtgccgatggcgcgg
gccagcatcctgtggctgatgggggagtactgtgagagggtccctcagatcgcccccgac
gtcctccgcaagatggccaagagcttcacctccgaggaggacatcgtcaagctgcagact
gtcaacctggctgccaaactctacctcaccaactccaaacagaccaagttgttgacccag
tacattttgaacctggggaaatatgaccagaactatgacatcagagaccgcacgcgcttc
atccgccagctcattgtgcccaatgagaagagcggcgcactcggcaagtacgcccgccgc
atcctgctggcgcccaagccggcgcccgtcctcgagtccacatacaaagaccgtgatcgt
taccagttgggaacgctgtcccacaccatcaacaccaaagccagcggctacctggagctc
tctgattggcctgctgtggctcctgaccaatcagtgaggaacgtggaggtgattgagccg
gtgaaggagtgggctccgtcgctagggaagactggaaagtccaagctgtccaagtcatca
gatgataagttctactctgactctggagaggagaaggagaagggctcagggagcagtagc
agtgatgacagcagcagcagtagtgaagagtcaagcagtgaggcggagagcgatgaggaa
aagagcagtagtcagagcagtgaagagtccgacaagtcctccagccaatcagagaagagt
tccagtgagtccgactctgaacagaagaaaacaactaagaaaccaccacagaagaagaca
gtcaaaccaacggccaaagacagtgattcggacgagaatgggaacgttgctaaagaaacc
agcagttcgtctgcagaagagacctcgtctggttccgaatctgggtccgacgcagactcc
cattcaggcaccgaacgcaagaagaaaaccaagtctaaagccaaacccaagatggaggtg
aagtcaacgaaggaggtgtccttgttgaaggaggtgtccctgttggatttggacgacttc
actcctacaccagtgacccggcccaagatgtctgtcctctctcccagcctgctcggagac
ctggaaggcctgtctctctccaacatctcctccaccatacaggtgagcggcccggcattt
gtccccgagaagagccatgacctgctgcaccgtatgactggtaaaggtctgtcagcccag
taccagttccccagacagccctgtctctaccagcccaccatggtctcagtccagatcagc
ctgaccaacaccactgaccaccctctggaacagatccacattggagacagggaccccaca
ggactcgacatgcactgcttcaatgctatagaatgtctgctgccagaggcctcggtgact
gtgtctttgggcgtcgacttcaacgactcaacacaagcagccaacttccagctgtgtacg
aaggaggaccagttcagtgtgtccatccagcctgccgtaggagaactcttcctacccgcc
accatgaccgaacaggacttccgcaaggagcaagggaaactgctgggcatgaacgagagc
tcggcaaccatcaccatggcagcagagaacacgacccgccaaccaatcagcagacaggtg
gcaaccgtggccaacctgggagtggttccatccggtcaagacaacatccacaggtttgct
ggtaagacggccagtagtggagctctggtgctggtgacagtggagctgagggagttgtct
gcagctctgatcaccatcaacacagagaagagtgtcatgggccccatgctgctccgagac
ctgaaacgtgccctggcctgggcctag
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