Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139387872
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Entry
139387872 CDS
T10872
Name
(RefSeq) rab9 effector protein with kelch motifs isoform X1
KO
K20285
Rab9 effector protein with kelch motifs
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139387872
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
139387872
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_4
Kelch_3
Kelch_5
Kelch_1
Kelch_6
Kelch_2
NANM
DUF1668
Motif
Other DBs
NCBI-GeneID:
139387872
NCBI-ProteinID:
XP_070990282
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All DBs
Position
29:complement(20682278..20690946)
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AA seq
416 aa
AA seq
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MDASHRMESMELLPVLEPEDKPRAGLWYAMIPRGGGPGVSVGHTCIYIPSEDDGKGKIQI
IGGANPNGSFSESHVINLDSHEWDIPEWEGLEARYEHCSFVPESCPQSLWVFAGAQQSGN
RNCVQNLQLTGGGLWKGVEVKGTPPCPRTYHTNSASVGDRLFVFSGGDSGATPVSDPNLH
VFDTVSCTWSQPDTQGRHPPARHGHVVTAVGPKIYIHGGMAGEKFYSDIYSLDTSSMKWE
KVQAKGDIPPGVAAHSAVALGKNIYIFGGMTPEGASNAMYRFQCGEAKNIYFGIFNECGI
YSGSPLAAAKVWQNEGRYIILKTLQCIQNRFHNTLSACPQARTPLPHIYNTKSMCTCVFS
AYVIMCVCTCAASMFMLLHSPRCSIRCSFVCFFQSDYTACISYLMWNIVPCSQASM
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggatgcctcccacagaatggaatcaatggaattacttcctgtgctggaaccagaggat
aaaccacgagcaggactgtggtatgctatgatacccagaggaggtggtccaggagttagt
gtgggccacacctgtatatacatcccctctgaggatgatggcaaggggaagatccagatc
ataggaggagccaaccctaatggcagcttttcagaatcccatgtcataaacctggacagt
cacgagtgggacattcctgaatgggagggtctggaggcacggtatgaacactgcagcttt
gtccctgagagctgtccacagagcctgtgggtgttcgctggggcacagcagagtggcaac
cgcaactgtgtccagaacctacaactcacaggcggtgggttgtggaagggtgtagaggtg
aaagggacgcccccctgtcccaggacgtatcacactaactcagccagcgtcggggaccga
ctgtttgtcttctctggaggggactcaggggccacacctgtctcggaccccaaccttcac
gtcttcgacacagtttcctgcacctggtctcagccagacacacagggcagacatccccct
gcaagacacggccacgtggtgactgcggtaggacccaaaatctatatccatggaggcatg
gcaggagagaagttctacagcgacatctactctctagacaccagcagtatgaagtgggag
aaggtccaagccaaaggagacatccccccgggggtggctgcccactcagctgtggccctc
ggaaagaacatctacatctttggagggatgaccccagaaggggccagcaatgcaatgtac
agatttcagtgtggtgaggccaaaaatatctactttggaatatttaatgaatgtggtatt
tattctggatccccattagctgctgccaaggtctggcaaaatgaaggccgttatatcatt
ttaaaaacattacaatgcattcaaaacagatttcacaacacactaagtgcgtgccctcag
gcccgtactccactaccacatatatacaacacaaaatccatgtgtacgtgtgtgtttagt
gcgtatgttatcatgtgtgtgtgtacatgtgctgcctctatgtttatgttgcttcacagt
ccccgctgttccataaggtgtagttttgtctgtttttttcaatctgattatactgcttgc
atcagttacctgatgtggaatatagttccatgtagtcaagcctctatgtag
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