Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139387911
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Entry
139387911 CDS
T10872
Name
(RefSeq) tubulin alpha chain, testis-specific
KO
K07374
tubulin alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04210
Apoptosis
ocla04530
Tight junction
ocla04540
Gap junction
ocla04814
Motor proteins
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139387911
09143 Cell growth and death
04210 Apoptosis
139387911
09144 Cellular community - eukaryotes
04530 Tight junction
139387911
04540 Gap junction
139387911
09142 Cell motility
04814 Motor proteins
139387911
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139387911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139387911
03036 Chromosome and associated proteins [BR:
ocla03036
]
139387911
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139387911
04147 Exosome [BR:
ocla04147
]
139387911
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139387911
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
139387911
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
139387911
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139387911
Exosomal proteins of other body fluids (saliva and urine)
139387911
Exosomal proteins of colorectal cancer cells
139387911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
139387911
NCBI-ProteinID:
XP_070990374
LinkDB
All DBs
Position
29:9091946..9095403
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RVRKLSDQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEMLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEGEAEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctctatccacgttggtcaggccggtgttcagatcgggaatgcctgc
tgggaactgtactgcttggaacatgggatccagcccgatgggcagatgcccagtgacaaa
accatcggcgggggggatgactccttcaacaccttcttcagcgagaccggagcgggaaaa
catgtcccccgtgctgtgtttgtggacctcgaaccaactgttgttgatgaggttcgcacc
gggacataccgtcagttgttccacccggagcagctcatcaccggtaaagaggatgccgcc
aacaactatgctcgtggccactacacaattggcaaggagatcgtcgacctggtgctggac
cgagttcgcaagctgtcggaccagtgcactgggcttcagggcttcctgatcttccacagc
tttggtggtggaaccggctcaggttttgcctctctgctcatggagagactgtctgtggac
tatggcaagaagtccaaactggagtttgccatataccccgcccctcaggtgtccacagca
gtggtggagccctacaactctatcctgaccacccacaccaccctggaacactcagactgt
gccttcatggtcgacaacgaggccatctacgacatctgccgtcgtaacctggacatcgag
cgccccacttatactaacctcaacaggctcattggccagatcgtctcctccatcacagcc
tcgctgcgtttcgatggagccctcaatgtggacctgactgagttccagaccaacctggtg
ccatacccccgtatccacttccccctggtcacctacgcacctgtcatctctgctgagaag
gcctaccacgagatgctttctgtggcagagatcaccaacgcttgcttcgagccagccaac
cagatggtgaagtgtgaccctcgccatggcaagtacatggcctgctgcatgctgtatcgt
ggggatgtggtgcctaaggatgtcaatgctgccatcgccaccatcaagaccaaacgcact
atccagtttgttgactggtgccccaccggcttcaaggtaggcatcaactaccagccaccc
acggtggtgccaggtggagatcttgccaaggtccagagagccgtttgcatgttgagcaac
accacagccatcgctgaggcctgggctcgactcgaccacaagtttgatctgatgtacgcc
aagcgtgcctttgtacactggtatgtgggagagggtatggaggagggggagttctctgag
gccagagaagatctggctgccctggagaaggactacgaggaagtgggagtggattcggtg
gagggagaggctgaggaaggagaggagtactga
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