Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139387912
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Entry
139387912 CDS
T10872
Name
(RefSeq) polyubiquitin-B
KO
K08770
ubiquitin C
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03320
PPAR signaling pathway
ocla04120
Ubiquitin mediated proteolysis
ocla04137
Mitophagy - animal
ocla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139387912
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139387912
04137 Mitophagy - animal
139387912
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
139387912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139387912
Ubiquitin system [BR:
ocla04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
139387912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
139387912
NCBI-ProteinID:
XP_070990375
LinkDB
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Position
29:9085479..9087502
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AA seq
305 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagacacttaccggcaagaccatcaccctggaggtcgagcccagt
gacaccatcgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagcgcttgatcttcgctggtaagcagctggaagatggtcgcactctctccgactacaac
atccagaaggagtccaccctccatcttgtgctccgtctgaggggtggtatgcagatcttc
gtgaagacccttaccggcaagaccatcaccctggaggttgagcccagtgacaccatcgag
aatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagcgcttgatc
ttcgctggtaagcagctggaagatggtcgcactctctccgactacaacatccagaaggag
tccaccctccatcttgtgctccgtctgaggggaggtatgcagatcttcgtgaagaccctt
accggcaagaccatcaccctggaggtcgagcccagtgacaccattgagaacgtcaaggcc
aagatccaggacaaggagggcatccccccagaccagcagcgcttgatcttcgctggtaag
cagctggaagatggtcgcactctctctgattacaacatccagaaggagtccaccctccat
cttgtgctccgtctgaggggaggtatgcagatcttcgtgaagacccttaccggcaagacc
atcaccctggaggtcgagcccagtgacaccatcgagaacgtcaaggccaagatccaggac
aaggagggcatccccccagaccagcagcgcttgatcttcgctggtaagcagctggaagat
ggtcgcacgctctctgactacaacatccagaaggagtccactcttcacctggtcctgcgt
ctccgtggtggcaactaa
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integrated database retrieval system
