Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139387939
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Entry
139387939 CDS
T10872
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040
Spliceosome
Brite
Spliceosome [BR:
ocla03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
139387939
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NCBI-GeneID:
139387939
NCBI-ProteinID:
XP_070990435
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Position
29:complement(6026420..6032241)
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AA seq
506 aa
AA seq
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MSDDEEAPLVKKTRIFYGSLEEKERERLGREASGSGKDSVKAGIEAGNINISSGESLELE
ERVTERQSEVLADFERRKRARQITVSTDDAEVKACLRALREPITLFGEGPAERRERLRNI
LSVVGPDALKKSKKDDEKSKRSQEECQQTWYHEGPTTLKEARLWLARYSLPRAVKRLEDA
RAHREIPESTRTVRTQELHKTLRNLNNFCSQIGDDRPISFCQFSPNSKMLVTASWSGLCK
LWNVPDCTLVRTLRGHNTHVGAICFHPQATLTLEDSDVNMASCAADGSVKLWSLDSDVPV
ADIEGHSMRVARVAWHPSGRFLGTTCYDNSWRLWDLEAQEEILHQEGHSKGVHDMQFHPD
GSLAATGGLDSFGRIWDLRTGRCVMFLEGHLKEIYSIDFSPNGYHAATGSGDNTCKVWDL
RRRKCIYTIPSHQNLVSSVKFQPNNGHFLLTGAYDNTAKVWTHPGWSPLKTLAGHEGKVM
GVDMSPDGQLIATCSYDRTFKLWMSE
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgatgaagaagctccgctggtgaagaagaccaggatcttctatggcagtttg
gaggagaaggagagggagaggctgggacgagaggcttctgggtcaggcaaagattctgtc
aaagcaggaatcgaggctggcaacattaacatctccagtggcgagtcccttgagcttgag
gaacgtgtgactgagcgccagtctgaggtattggctgactttgaacgcagaaagagagcg
agacaaatcacagtatccacagacgatgcagaggtcaaagcctgcttacgggcccttagg
gaaccaatcacactgtttggggaggggcctgctgagagacgagagaggctaaggaatatc
ctctctgtagtgggtccagatgcattgaaaaaatcgaagaaggacgatgagaaatccaaa
cgctcccaagaggagtgtcagcagacatggtaccatgaagggccgaccactcttaaggag
gcaaggctttggttggccagatactctctgcccagggctgtgaaaaggttagaagatgcc
agagctcacagggagatcccagaatctacacggacagtcaggacgcaagaacttcacaag
acgctcaggaacctgaataacttttgcagtcagattggtgacgacaggcctatatccttt
tgccagttcagccccaactccaaaatgctggtgactgcatcttggagtggcctgtgtaaa
ctgtggaatgttcctgactgtacccttgtccgtacccttcgaggccacaacacccacgtg
ggggccatctgttttcatcctcaggccactctgactctggaggactctgatgttaacatg
gcctcctgtgctgccgacggctccgtcaaactctggagtctggacagcgacgtgcctgtc
gctgacatcgagggccactccatgagggtggcgagagtagcctggcatccctctggaagg
ttcctgggcaccacctgctatgataattcgtggaggctgtgggacctggaagcccaggag
gagatcctgcaccaagagggacacagtaaaggagtccatgacatgcaattccaccctgat
ggatctctggcagctactgggggtctggattcatttggccgtatttgggatcttcggacc
gggcgctgtgtgatgttcctggagggccacctcaaagagatctacagcatcgacttctct
cccaacggctaccacgcagcaacaggaagtggggataacacctgtaaggtgtgggacctg
cgtcgcaggaagtgcatctacaccatcccctcccatcagaacctggtgtcctctgtcaaa
ttccagcccaataacggtcacttcctcctgactggggcctatgacaacacagccaaggtg
tggacccacccgggctggtcccccctgaagaccctggcgggccacgagggaaaggtgatg
ggcgtggacatgtcccctgacggacagctcatcgccacctgctcttacgaccgcaccttc
aagctctggatgtcagaatga
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