Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388039
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Entry
139388039 CDS
T10872
Name
(RefSeq) tubulin alpha chain, testis-specific-like
KO
K07374
tubulin alpha
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04145
Phagosome
ocla04210
Apoptosis
ocla04517
IgSF CAM signaling
ocla04530
Tight junction
ocla04540
Gap junction
ocla04814
Motor proteins
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139388039
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139388039
09143 Cell growth and death
04210 Apoptosis
139388039
09144 Cellular community - eukaryotes
04530 Tight junction
139388039
04540 Gap junction
139388039
09142 Cell motility
04814 Motor proteins
139388039
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139388039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139388039
03036 Chromosome and associated proteins [BR:
ocla03036
]
139388039
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139388039
04147 Exosome [BR:
ocla04147
]
139388039
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139388039
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
139388039
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
139388039
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139388039
Exosomal proteins of other body fluids (saliva and urine)
139388039
Exosomal proteins of colorectal cancer cells
139388039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
139388039
NCBI-ProteinID:
XP_070990635
LinkDB
All DBs
Position
29:9110635..9113880
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSCNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNFARGHYTIGKEIVDLVLD
RVRKLSDQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPSPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICSRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEMLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEGEAEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctctatccacgttggtcaggccggtgttcagatcgggaatgcctgc
tgggaactgtactgcttggaacatgggatccagcccgatgggcagatgcccagtgacaaa
accatcggcggaggggatgactcatgcaacaccttcttcagcgagaccggagcgggaaaa
catgtcccccgtgctgtgtttgtggatctcgaaccaactgttgttgatgaggttcgcacc
gggacataccgtcagttgttccacccggagcagctcatcaccggtaaagaggatgccgcc
aacaacttcgcccgaggccactacaccattggcaaggagatcgtcgacctggtgctggac
cgagttcgcaagctgtcggaccagtgcactgggcttcagggcttcctgatcttccacagc
tttggtggtggaaccggctccggctttgcttctctgctcatggagagactgtcagtggac
tatggcaaaaaatccaaactggaatttgccatttacccgtcacctcaggtgtccacagca
gtggtggagccctacaactctatcctgaccacccacaccaccctggaacactcagactgt
gccttcatggtcgacaatgaggccatttatgacatttgcagtcggaacctggacattgag
cgccccacttatactaacctcaacaggctcattggccagatcgtctcctccatcacagct
tctctgcgtttcgatggagccctcaacgtggacctgactgagttccagaccaacctggtg
ccatacccccgtatccacttccccctggtcacctacgcacccatcatctctgctgagaaa
gcctaccacgagatgctttctgtggcagagatcaccaacgcttgcttcgagccagccaac
cagatggtgaagtgtgaccctcgccatggcaagtacatggcctgctgcatgctgtatcgt
ggggatgtggtgcctaaggatgtcaatgctgctatcgccaccatcaagaccaaacgcact
atccagtttgttgactggtgccccaccggcttcaaggtaggcatcaactaccagccaccc
acggtggtgccaggtggagatcttgccaaggtccagagagccgtttgcatgttgagcaac
accacagccatcgctgaggcctgggctcgactcgaccacaagtttgatctgatgtacgcc
aagcgtgcctttgtacactggtatgtgggagagggtatggaggagggggagttctcagag
gccagagaagatctggctgccctggagaaggactacgaggaagtgggagtggattcggtg
gagggagaggctgaggaaggagaggagtactaa
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