Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388061
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Entry
139388061 CDS
T10872
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 4-like
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139388061
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139388061
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
SALM family
139388061
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
139388061
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
LRR_9
fn3
Ig_2
LRR_EndoS
LRR_14
LRRCT
Sp38
Motif
Other DBs
NCBI-GeneID:
139388061
NCBI-ProteinID:
XP_070990677
LinkDB
All DBs
Position
29:complement(28849887..28860906)
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AA seq
919 aa
AA seq
DB search
MPKSKSQISHPYSAPPHSKSSRRLSPKQHSLKGVHPEINLLSPIEFKPKVTSPSLRPPAC
SMTPQTVVWLAVVTCSCVFSALLGTGVSAGETWGMVSICPFHCVCRNLSESLSTLCVNKG
LLFVPPDIDRRTVELRLADNFILEVGRVDFANMSGLVELTLSRNTIHALKPLAFADLQSL
RSLHLDTNRLIVVGPKDLSGLTNLQHLIINNNQLTNISTEAFDDFLQTLEDLDLSYNNLR
KVPWEAIQNMASLHTLNLDHNLLDHIAEGSFGELYKLARLDMTSNRLQTLPPDPLFSRSQ
TGVVSPTPYNTVISLSFGGNPLHCNCELLWLRRLIRGDDMETCATPVHLAGRYFWSIPEE
EFTCEPPLITRHSNKLWVLEGQRATLRCRAIGDPEPIIHWISPDDRIVANSSRVHSYYNG
TLDVLVTRARDDGAYTCIAINAAGEATALIDLKIIPLPHRGNNTVPLTSPRGDPGSSDIS
SGRRGAGRKGGGGVVTVKNATEGESGDGDASEHLVGVLGATATSAQVRWVLGRATGPYLV
WMYQIQYNCTADDALVYRILPPTSNAFLLKNLVSGADYSLCVLAIFDDGLSTLATTKVLG
CTQFSTKEDFPECRSLQAHFLGGTLTIMVGGVIVVMLLVFTVAMMVRHRVCGDCRDEGHY
PAHHHDNFLPSKGEVDVYAQTNGNGRVMMVALPKGILGQKAKPLPSKTKPQAKNKPRTTL
DSDQLSGERKAEEQGLEVGVRGKRFPPFTPESERVTLYYSPAITSQTLPHPRAHKALRHS
GKLKLRRSEERERDLDKMVGSRCSLDSGAQGEEGRLDDWRRGDRPPLGRTRSCSFDVGEI
TTTTCYSYAKRLSVIWTRRSQSVHGMLVQCASTASSASSMGSDQQPALTHGYLHAFNTSN
SNSNTRVAAKAGDLEESVV
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaatccaaatcacaaatatcacacccatactcagctccaccccactcaaaatcc
tctaggaggctctctccaaagcaacactctctaaaaggtgtccacccggaaataaacctg
ttatctcctattgaattcaagccaaaagtcaccagcccttccctgagaccccctgcctgc
tctatgaccccacagactgtagtctggctggccgtggtgacctgctcctgtgtgttctct
gctctgctgggcacgggcgtgtccgctggagagacctggggcatggtctccatctgtccc
ttccactgtgtgtgccgaaacctctcagagtctctgagcacactctgtgtcaacaagggc
ctgctgttcgtccctcctgacattgaccggcgcacagtggagctccgtctggctgacaac
ttcatcctggaggtgggcagagtggactttgccaacatgtcaggcctggtagagctaact
ctgtccaggaacaccatccatgccctgaaacctctggccttcgctgaccttcagagcctg
cgttcacttcacctggacaccaaccggctgatcgtggtggggccaaaagatctgtccggc
ctaactaacttgcagcacctcatcatcaacaacaaccagctgaccaacatctccaccgag
gcatttgatgacttcctgcaaacgctggaggatctggacctgtcctacaacaacctgagg
aaggtcccctgggaggccatccagaacatggccagcctgcacaccctcaacctggaccac
aacctcctggaccacatcgccgagggctccttcggagaactctacaagctggctcgtctc
gacatgacgtccaaccggctgcagactctaccccctgaccccctgttctcccgctcccag
acaggcgtggtcagccccaccccctacaacactgtcatcagcctgagcttcggtgggaac
cccctgcactgtaactgtgagctgctgtggttgaggcggctgatccgcggggacgacatg
gagacgtgcgccactcccgtccacctggctgggcgctacttctggtccattccagaagag
gagtttacctgtgagcctccgctcatcacgcgccactccaacaagctgtgggtgctggag
ggccagagggccacgctgaggtgccgtgccattggagacccagagccaatcatccactgg
atctcccctgacgaccgcatagtagccaactccagccgtgtgcactcctactacaacggc
acactggacgtgctggtgacccgtgcccgtgacgatggggcatacacctgcattgccatc
aatgctgccggggaggctacggccctgatagacctgaagatcatccccctccctcaccgc
ggcaacaacactgtccccctaaccagccctcgaggggatcccgggtcatcagatatctcc
agtgggagaagaggggcaggccggaagggtggtggaggggtggtgactgtcaagaacgcc
acagagggggagagtggagatggagatgccagtgagcatttggtgggggtcctgggagcg
actgccacctctgcccaggtgcgctgggtcctgggccgggccactgggccgtacctggtg
tggatgtaccagatccagtacaactgcactgcagacgacgccctggtgtacaggattctg
cctcctacaagcaacgcgttcctgctaaagaaccttgtgtctggagctgactacagcctt
tgtgtcctggccatctttgatgacgggctgtccaccctggccaccaccaaggtcctgggt
tgcacccagttcagcaccaaggaggacttcccagaatgccgttccctgcaggcgcacttc
ctgggcggcacactgacaatcatggtgggtggggtcatcgtggtgatgctgctggtgttc
accgtggcgatgatggtgaggcaccgcgtctgtggagactgcagagacgagggtcactac
cctgcccatcaccatgacaacttcctgccctccaagggagaagtggacgtttacgctcag
accaatgggaatgggagagtgatgatggtggctctgcccaaaggcattcttggccaaaag
gctaagcccctgccatcgaaaaccaaaccccaagccaagaacaagcccaggacaacgctt
gactctgatcagctcagtggagagagaaaggctgaggagcagggcctggaggtaggcgtg
agggggaaaagattcccccctttcacccctgagagtgagagagtgacactgtactactcc
cctgccatcacctctcagaccttaccccatcccagagctcacaaggccctgagacactca
ggcaagctcaagctgcgccgctctgaggagagggagagagacttggacaaaatggtgggc
tccagatgcagcctggactctggggcccagggggaggaggggcggttggatgactggagg
aggggcgatcgtccaccactcgggaggacacgcagctgctcctttgatgtgggcgagatc
accacaacaacctgctacagctatgccaagcgactgagtgtgatatggaccaggaggagc
cagtcggtgcacggcatgctggtccagtgcgcctcaacggccagttcagcgagcagcatg
ggcagcgaccaacagcctgctctcacacatggctacctgcacgccttcaacacctccaac
tctaactctaacaccagagtggctgccaaagctggagacctggaggagagtgttgtgtag
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