Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388064
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Entry
139388064 CDS
T10872
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-2-like
KO
K04813
nicotinic acetylcholine receptor beta-2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139388064
04082 Neuroactive ligand signaling
139388064
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139388064
Ion channels [BR:
ocla04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
139388064
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
Motif
Other DBs
NCBI-GeneID:
139388064
NCBI-ProteinID:
XP_070990685
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All DBs
Position
3:12041419..12091969
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AA seq
538 aa
AA seq
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MGAWTRLLCLLAIVRGSLGADTEERLVEHLLNPAHYNKLIRPATNGSELVTVQLMVSLAQ
LISVHEREQVMTTNVWLTQEWQDYRLTWVPEEFDGMEKVRLPSKHIWLPDVVLYNNADGM
YEVSFYSNAVVSHDGSIFWLPPAIYKSACKIEVKHFPFDQQNCTMRFRSWTYDRTEIDLI
LRSDVASMDDFTPSGEWDIIALPGRRNENPADPTYVDITYDFIIRRKPLFYTINLIIPCV
LITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLVGKYLMFTMV
LVTFSIVTSVCVLNVHHRSPTTHTMPPWVKLVFLNKLPALLFMRQPQNSCERQELRQRRR
GQEQREGGRDGGSAGGLMVGLGLGGGGGGTDNNEPCTCYVNRASVKQFVGELGGGTGGGG
GGGSMEGLNGLREDREGGQGNRPRGKQVGGGPALTQAVLGQACPGLEEAVDGVRFIANHM
KTEDDDQSVSEDWKYVAMVIDRLFLWIFIIVCVSGTVGMFLQPLFQNYTAKTITNTNG
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcttggacgcggctgctgtgcctactcgccattgtgagaggcagcctgggggcg
gatactgaagagcggctggtggagcacctgctaaaccctgcccactataacaaactgatc
cgcccagcgaccaatggttctgagctggtgacggttcagttgatggtgtcactggcccag
ctcatcagtgtgcacgagagagaacaggttatgaccaccaacgtctggctcacacaggaa
tggcaggactaccgtctgacttgggtccctgaggagtttgatggcatggagaaggtcaga
ctgccttccaaacacatctggctgcccgacgttgtgctgtataacaatgctgacggaatg
tacgaggtctccttctactccaacgcggtggtctcccatgacggcagtatcttctggctg
cctccagccatctacaagtcagcctgtaagatcgaggtcaaacacttccccttcgaccag
cagaactgcaccatgaggttccgctcctggacctacgaccgcacagagatcgacctgatc
ctgaggtccgatgtggccagcatggacgacttcacacccagcggagagtgggacatcatc
gccctgccggggcgccgcaacgagaaccctgccgaccccacctacgtagacatcacttat
gacttcattatccgcaggaaacctctgttctacaccatcaacctcatcatcccctgtgtc
ctcatcacctctctggctatcttagtgttctatctgccctctgactgtggagagaagatg
accctgtgtatctctgtcctgctggccctcactgtgttcctcctgctgatctctaagatc
gtcccccccacctccctggacgttcctctggtcgggaagtacctgatgttcaccatggtc
ctggtgaccttctctattgtcaccagtgtgtgtgttctcaacgtgcaccaccgctcaccc
accacacacaccatgcccccctgggtcaagctggtgttcctcaacaaattgcctgcgctg
ctcttcatgcgccagccccagaacagctgcgagcgtcaggagctgcgccagcgacggagg
ggccaggagcagagggaggggggcagggatgggggctctgccggggggctgatggtgggc
ctggggctggggggcggagggggtggcacggataacaacgaaccctgtacgtgttacgtg
aaccgggcgtcggtgaaacagtttgtaggggagctgggagggggcacggggggaggaggg
ggaggggggtcgatggaggggctgaacgggctgagggaagacagggagggggggcagggg
aaccggcccagggggaaacaggtaggagggggcccagccctgacccaggccgtgctagga
caagcctgccctgggttggaggaggctgtcgacggggtccgcttcatcgccaaccacatg
aagactgaagacgacgaccagagtgtgagcgaggactggaagtatgttgccatggtgatc
gaccgtctcttcctgtggatctttataattgtgtgtgtgtccggaaccgttgggatgttc
ctccagccactgttccagaactacactgccaagaccatcaccaacaccaatggctga
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