Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388065
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Entry
139388065 CDS
T10872
Name
(RefSeq) katanin p60 ATPase-containing subunit A-like 1
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139388065
Enzymes [BR:
ocla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
139388065
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
139388065
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
KATNA1_MIT
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
TIP49
AAA_33
AAA_14
Mg_chelatase
AAA_16
AAA_22
NPHP3_N
AAA_28
AAA_7
IstB_IS21
TsaE
nSTAND3
AAA_17
AAA_2
RNA_helicase
ORC-CDC6-like
AAA_25
AAA_18
NACHT
Parvo_NS1
AAA_24
PhoH
Zeta_toxin
SRPRB
bpMoxR
Motif
Other DBs
NCBI-GeneID:
139388065
NCBI-ProteinID:
XP_070990682
LinkDB
All DBs
Position
29:complement(38672652..38693948)
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AA seq
491 aa
AA seq
DB search
MNLAEICDNAKKGREYALLGNYDSSMVYYQGVIQQIHKHGQALRDPALKVKWQQVRQELL
EEYEQVKGIVGTLESFKVDKPADFPVPQSEEGPRDPAVWPPPTPAEHRAPTAVKRPNTGV
KPQQRKDSPGMQPRGAPGGRGQTNPKTDRPAPRDAPRGTKVRDDKGKKAVAEGAGDGELK
KFDGSGYDSDLVEALERDIVSRNPNIHWGDIADLEDAKKLLREAVVLPMWMPDFFKGIRR
PWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFY
APTTIFIDEIDSICGSRGKSDEHEASRRVKSEILVQMDGVGGASENDDPSKMVMVLAATN
FPWDIDEALRRRLEKRIYIPLPTAVGRAELLGISLKEVDVADDVDLALIADKIDGYSGAD
ITNVCRDASMMAMRRRIQGLSPEEIRALSKEELQMPVTMDDFTITLKKISKSVSAADLEK
YQAWMEEFGSV
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggcagagatctgtgacaacgctaagaagggcagagagtatgctctgctgggg
aactatgactcctctatggtctactaccagggagtgatccagcagatacataaacacggc
caagccctcagagaccctgcactcaaagtcaagtggcaacaggtgagacaggagttgttg
gaggagtatgagcaggtgaaaggcattgtgggaactctggagagttttaaggtggacaag
ccagctgacttccccgtccctcagtctgaggaggggcccagagaccccgcagtgtggccc
ccacccacccctgcagagcacagggcccctactgcagtgaagcgtcctaacactggggtg
aaaccccagcagaggaaggactctccaggtatgcagcccagaggggctccgggagggagg
ggccagaccaaccctaaaacagaccgccccgcccccagggatgccccccgaggcaccaag
gtcagagacgacaagggtaaaaaggctgtagcagagggagcaggggatggagagctgaag
aagtttgatggttcggggtacgacagtgacttagtggaggcactggagagagacatcgtc
tcccgcaaccccaacatacactggggggacatcgctgacctggaagatgctaagaagctg
ctgagagaagcggtggttctgcccatgtggatgccagacttcttcaagggtatacgccga
ccctggaagggtgtgttgatggtgggcccaccagggacaggaaagaccatgctggctaaa
gccgtggctacagagtgtggcaccaccttcttcaacgtatcctcctccacactcacttcc
aaatacagaggagagtctgagaaactggttcgcctgctctttgagatggcgaggttctat
gccccgaccaccatcttcatagatgagatagactccatttgtgggagtcgagggaagtcg
gacgaacacgaagccagccgcagagtcaagtcagaaatactggtacagatggacggtgtg
gggggagcttcagagaatgacgatccctctaagatggtgatggttctggctgctactaac
ttcccctgggacatcgatgaggcactacggagacgactggagaagagaatctacatccca
ctgcctacagccgtgggtcgtgctgaactgctggggatcagtctaaaggaggtggatgtg
gctgatgatgtggacctggctctcatcgctgacaagatagacggatactctggagctgac
atcaccaacgtctgcagagatgcgtctatgatggctatgcgtcggcgtatccagggcctc
tctccagaggagatcagagctctgtctaaagaagagcttcagatgcctgtcaccatggac
gacttcacaatcaccttgaagaagatctccaagtctgtctccgctgccgacttggagaag
taccaggcctggatggaggagtttggatctgtctag
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