Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388075
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Entry
139388075 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase ARK2C-like isoform X1
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139388075
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139388075
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139388075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
U-box_ZFPL1
zf-ANAPC11
zf-RING_Vps41
zf-RING_16
RINGv
Prok-RING_4
zf-RING_10
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
139388075
NCBI-ProteinID:
XP_070990703
LinkDB
All DBs
Position
29:13599929..13617671
Genome browser
AA seq
346 aa
AA seq
DB search
MVLVHVGYLVLPVFGSVRNRGAHFTRHQHSHATSCRHFNLAAPQAPISAEFPLGHASQPP
QTGLAPQLSPAPHQPPALPAPPQFQDVQGPPFLPQALHQQYLIQQQLLEAQHRRILPHSR
RTQERVPLNPHRLRSGYDYTPPLHVPQPISQQPRYLAEGTDWDLSVDAGLSHHQYQLQQL
PQHYQHYLAASPRMHHFPRNTTSTQVVVHEIRNYPYPQLHLLALQSLNPSRHASAVRESY
EELLQLEDRLGSVSRGAVQTTIERFTFPHKYKKRKPLDMKIGEKDEETDVDEKCTICLSM
LEDAEDVRRLPCMHLFHQGCVDQWLATSRKCPICRVDIETQLHPDS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagtacatgtcggatatttggttcttcccgtatttggctctgtaagaaataga
ggagcacacttcaccaggcatcagcacagccatgctacctcctgccgacattttaacctg
gcggccccccaggctcccatctcagcagagttccccctgggccatgccagccagcccccc
cagactggcctggcccctcaactgtccccagccccccaccaacctccggccctgccggcc
ccccctcagttccaggacgtccaggggcctccgtttctacctcaggccttacaccagcaa
tacctcatccagcagcagcttctagaggcgcagcaccgcagaatcctcccacactcccgg
cgaacacaggagcgcgttcctctgaaccctcacaggctccgctcggggtatgactacacc
cctcccctccacgtcccccagccaatcagccaacagccgcgctacctggccgagggcaca
gactgggacctcagtgtggacgctggcctctctcaccatcagtaccagctccagcagctt
ccacagcactatcagcattacctggcggcatcccccagaatgcaccactttcccaggaac
acgacttctactcaagtggttgtacacgagatcagaaactacccatacccccagctacac
ctgctggctctacagagcctcaacccctcacgccacgcttcggctgtacgagagagctat
gaggagctgttgcagcttgaagacaggctgggaagtgtcagtagaggagcagttcagacc
accatagagagattcaccttcccacacaaatacaagaagaggaagcctctggatatgaag
attggtgagaaagacgaggagactgacgtggatgagaaatgtaccatctgcctgtcgatg
ctggaggacgcagaggatgtcaggcggttaccctgcatgcacctcttccaccagggctgt
gtggaccagtggctggcgaccagcagaaagtgtccaatctgccgcgtagacatcgagacg
cagctccatcctgacagctga
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