Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388084
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Entry
139388084 CDS
T10872
Name
(RefSeq) general transcription factor IIIAa isoform X1
KO
K09191
general transcription factor IIIA
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139388084
03021 Transcription machinery [BR:
ocla03021
]
139388084
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139388084
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
139388084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
TFIIIA_zf-C2H2
zf-C2H2_4
zf-H2C2_2
Zap1_zf1
zf-C2H2_ZNF462_1st
Ta0938
zf-met
zf-C2H2_ZNF462
CHORD
zf_Hakai
Motif
Other DBs
NCBI-GeneID:
139388084
NCBI-ProteinID:
XP_070990741
LinkDB
All DBs
Position
29:32406327..32409545
Genome browser
AA seq
354 aa
AA seq
DB search
MELSQQVPRKSFICSFSDCHASYNKAWKLDAHICKHTGLKPFVCEHDGCDKSFCDKYHLA
RHQLSHSGERPFRCTVDGCTEAFTTNYNLKKHVNRKHNHDEEKLYEYVCSFEGCGKVFRK
NNQLKSHECQQHTKLPPFQLYSCTFEGCEKQFTFPNKLRLHEKVHRGYPCEKDGCSFIGK
TWTEYTNHRRDVHRALFQCNECNKVFRDTWFLKQHQRVHAEERQVFICPREGCQRSFTTP
FNLQSHIGSFHEELRPYTCPHEGCGKTFAMKQSLQRHSVVHDPERKKQKKPRPKRSLVSR
LSGYKPKNNSRPKPHAALQSESIARGQSEQTNTVGSEPITLVSLLQDTVFCNSG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggaattaagtcagcaagtaccgcgcaaaagttttatatgttcattctctgactgtcat
gcatcgtacaacaaagcatggaaactagatgctcatatttgcaagcacacagggctgaaa
ccatttgtgtgtgaacatgacggctgtgacaagtcattctgcgacaagtaccacctagct
cggcaccagttgagccacagtggagagagaccctttagatgtacagtagatggatgcaca
gaggccttcaccacaaattacaatttgaagaaacatgttaatcgcaaacacaaccatgat
gaggagaaactgtatgaatatgtgtgtagctttgagggatgtgggaaagtgttcaggaag
aacaatcagctcaagtcacatgagtgccagcagcacaccaaactacctccctttcagctt
tatagctgtacctttgagggctgcgagaaacaattcactttccccaacaaactacggctt
cacgagaaggtgcacagaggctacccctgtgaaaaagatggctgttctttcatcggaaag
acctggactgagtatactaaccataggagagacgtacacagagccctttttcagtgtaat
gagtgcaacaaggtgtttcgcgacacctggttcctgaagcagcaccagcgtgtccacgca
gaggagcgccaggtgtttatctgtcccagggaggggtgccagaggtccttcactacgcca
ttcaacctgcagagccacattggctctttccatgaggagctacggccttacacctgcccc
catgaaggctgtggaaagacctttgccatgaagcaaagcttacaacgccacagtgttgtc
cacgatccagaaaggaagaaacagaagaaaccccgacccaagcgatccctggtttccaga
ctgagtggttacaagcccaagaataacagtcgtccaaagccccatgcagctttgcaatca
gaatccattgcaaggggtcagtcagagcaaacgaacactgttggatcagagcctattacc
ctggtatcccttcttcaggacacagtcttttgcaactctggttaa
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