Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388106
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Entry
139388106 CDS
T10872
Name
(RefSeq) neurobeachin a
KO
K24183
neurobeachin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Membrane trafficking [BR:
ocla04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
139388106
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139388106
NCBI-ProteinID:
XP_070990776
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Position
29:39878677..40135970
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AA seq
3028 aa
AA seq
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MSSEKPGSATPLSDPDRDRAAHPPGPGQPQVVTGAGSAPIGDRMVSGSGSMVLPAVPIRN
IQMKFAVLVGLIQVGEVSNRDIVETVLNLLVGGEFDLEMNFIIQDSESIGCMVDLLSHCE
VTCQAEVWSMFTAILRKSVRNLQTSTEVGLIQQVLSKMSSVDDMIADLLVDMLGVMASYS
ITVKELKLLFSMLRGDNSIWPRHSIKLLSVLNQMPQRHGPDTFFNFPGRSAAAIALPPIA
KWPYQNGFTLNTWFRQDPLNNINVDKDKPYLYCFRTSKGVGYSAHFVGNCLIVTSLKSKG
KGFQHCVKYDFQPRKWYMISIVHIYNRWRNSEIRCYVNGQLVSYGDMAWHVNTNDSYDKC
FLGSSETADANRVFCGQLGAIYVFSEALNPAQIFAIHQLGPGYKSTFKFKSESDIHLAEH
HKQVLYDGKQASSISFTYNAKATDAQLCLESSPRENASIFVHSPHALMLQDVKAIVTHSI
HSAIHSIGGIQVLFPLFSQLDYRQLNDSSVDTSVCATLLAFLVELLKSSVAMQEQMLGGK
GFLVIGYLLEKSSRVHITRAVLEQFLSFAKYLDGLTHGAPLLKQLCDHVLFNAAIWIHTP
AKVQLSLYTYLSAEFIGTATIYSTIRRVGTVLQLMHTLKYYYWVSNPLESSGITPKGLDG
PRPSQKEIISLRAFMLLFLKQLILKDRGVKEDELQSILNYLLTMHEDDNIHDVLQLLVAL
MSEHPASMIPAFDQRNGIRVICKLLASNSENIRVQALKVLGYFLKHLGHKRKVEIMHTHS
LFTLLGERLMIHTNTVSVTTYNTLYEILTEQVCTQVVHKPHPEPDSTVKIQNPMILKVVA
TLLKSSSPSTELMEVKTLFLSDMIKLFSSSRENRRCLLQCSVWQDWMFSLGYINPKSPEE
QKMMEMVYNIFRILLYHAIKYEWGGWRVWVDTLSIAHSKVTYEAHKEYLAKMYEEYQRQE
EENIKKGKKGSVSTISGLSATPAPVVNGNLEIRELDDHSQSQTPESEAEYGEGGAGGVSR
NLLAEGGVGLGVKGPNREALTPGEEGQGSGVRVEVHDLLVDIKAEKVEATEVKLDDLDLS
PEGMVGGGGGDGGIENGPLVEVDSLLDSAYSAVVQKLKGNHGNLTSKDETVVTGLGAMED
DGNMGPLITLADEKDSVPSNNGFLFSKVDEKLLPALATTDPLVLPSPDQPNPLGSGPVHS
STSASDDLSLLAHMTSCRGSDLSHAQGGLPEVGPFKIQSPLADISSIAQRESQAAEIQGY
PGGEGPSGADGEVAGGKAGGDTVSTTSDTERSDDGKEMKIQTTATTQALHGRTAAQLERD
LRVDLGFRGMPMTEEQRRQFSPGPRTTMFRIPEFKWSPMHQRLLTDLLFALETDVHVWRS
HSTKSVMDFVNSNENIIFVHNTIHLISQMVDNIIIACGGILPLLSAATSPSSSKVSTNTK
AGGEGGADSHKGSKGEEVTPVPGGGGTGGEVELENMELTQGMSSETAVSFLSRLMAMVDV
LVFASSLNFSEIEAEKNMSSGGLMRQCLRLVCCVAVRNCLECRQRQRDRDIGCLSKSNLP
SSKSQDSLQSSAAASKDPDRLLQDVDINRLRAVVFRDVDDSKQAQFLALAVVYFISVLMV
SKYRDILEPQREIGRSSSLSGRSIRHEINSPTSTEHPSSSFSEGGRGEKQTPTSMEDSPL
ASLPHTDSGIGEEGHGPGGLNGAELGLGLGMAGRETDRDRHRERDGGGGDLLCTLSSEVR
RSRESLLDSPHNPNSASNLGQAPPSSISSISQTNKGINVKEILKSLVAAPLDGGEAGQEV
GPTPYHPDPALKTHPMLPMQFHSFDRSVMVPVKKPPPGTLSVNTVGTPTTSGAATPGSTP
NIFAAATATPKSMINTTGATDSASSSSSSSSSFVNGATSKNLPAVQTVAPLTEDTVESMS
VYCEVEQCELRSGLTPPELKPFSSLAGFQTAPRDAGQCLSITTKLERALEKVAPLLREIF
VDFAPFLSRTLLGSHGQELLIEGTGLVCMKSSTSVVELVMLLCSQEWQNSIQKNAGLAFI
ELINEGRLLCHAMKDHIVRVANEAEFILNRQRAEDVHKHAEFESNCAQYAADRREEERMC
DHLISAAKHRDHVTANQLKQKILNILTNKHGAWGTMSQSQLHDFWRLDYWEDDLRRRRRF
VRNPFGSTHPDVSLKALEDYGTEEEEEEGLKSKKTFRSQSVVSQNPEAELMLEGDDDAVS
LLQEKEMDNLAGPVVLSTPAQLVSPVVVVHGTLSITTTEIYFEVDEDDPAFKKIHTKVLA
YSEGLHGKWMFSEIRAVFSRRYLLQNTGLEVFMANRTSVMFNFPDQATVKRVVYSLPRVG
VGTSYGLPQARRISLATPRQLFKSSNMTQRWQRREISNFEYLMFLNTIAGRTYNDLNQYP
VFPWVLTNYESEELDLTLPGNFRDLSKPIGALNPKRAVFYAERYDTWEEDGTPPHHYGSL
YSTANTTLLWMLRIEPFTTFFLNANENQFDHPDRAFSGIARAWRDCQRDTADVKELIPEF
YYLPEMFVNSSGFELGQREDGTAVSDIELPAWAKKPEDFVRINRMALESEFVSCQLHQWI
DLIFGYKQRGPEAVRALNVFHFLSYEGSVTLDTIADPAQRELMETQIQTCGQTPSQLLIE
PHPPRSSAMHLCFLPQSPLMFKDQMQQDVIMVLKFPSNSPVTHVAANTLPHLSVPAAVTV
TCSRLFAVNRWHNTVGLRGAPGYSLEQAHHLPIEMDPLIANNSGVSKRQITDLVDQSIQI
NTHCFVVTADNRYILVCGFWDKSFRVYSTETGKLTQIVFGHWDVVTCLARSESYIGGDCY
IVSGSRDATLLLWYWSGRHHIIGDNPNNSDYPAPRAVLTGHDHEVVCVSVCAELGLVISG
AKEGPCLVHTITGDLLRALEGPELCLRPRLISVSSEGHCIICYERGRFCNFSINGKLLAQ
MEVNDSTRAILLSSDGQNLVTGGDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQRT
LITGMASGSIVAFNIDFNRWHYEHQNRY
NT seq
9087 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgagaagccgggttctgcaactccactttcagatccagaccgagaccgagcc
gctcatcccccgggccccggccagccccaggtcgttacgggcgctggctctgctcccatc
ggggacaggatggtctctggatccggctccatggtgctcccggccgtgccgatcaggaat
atccaaatgaaattcgccgtactggtcggtctcattcaggttggcgaggttagcaaccgg
gacatcgtcgaaacggttctcaacctgctggtgggaggtgagtttgacctagagatgaac
ttcatcattcaggacagtgagagtatcggctgtatggtcgacctactgtctcactgcgaa
gtcacctgccaagctgaggtgtggtccatgttcacagccatcctgaggaagagtgtgagg
aaccttcagaccagcacagaggtgggcctcatacaacaggtcctgtccaagatgagctct
gtggacgacatgatcgcagatctgctagtggatatgctgggggtgatggccagctacagt
atcacagtgaaggaactgaagcttctattcagtatgctgaggggagacaacagtatctgg
cctagacattctatcaagttgttgtctgtgttgaaccagatgcctcagagacacggtcca
gacaccttcttcaacttccctggtcgcagtgcagcggccatagcgttgcctcccatcgct
aagtggccttaccagaacggcttcactctcaacacctggttcagacaagatcccctcaac
aacatcaacgtagacaaggacaaaccatacctctactgttttcggaccagtaaaggtgtt
ggttactcagctcactttgtggggaactgtctgatcgtgacatcactcaagtccaagggg
aaaggcttccaacactgtgtgaagtacgactttcaaccccgcaagtggtacatgatcagc
atcgtccacatctataatcgctggaggaatagtgagatccgttgctatgtcaacggtcag
ctggtctcctatggcgacatggcctggcacgtcaacaccaatgacagttatgataagtgt
tttctaggttcgtcagagacggcagatgctaacagggtgttctgtggtcagctgggggcc
atctacgtgtttagtgaggctctcaaccccgctcagatcttcgccatacatcaactgggt
ccgggctacaagagcacgtttaaatttaagtcggagagtgatatccacctggccgagcac
cataagcaggtcctgtatgacgggaagcaggccagctccatctctttcacctacaacgcc
aaggccactgacgcacagctctgtctggagtcatcgcccagagagaacgcatccatcttc
gttcactcaccacacgcactcatgctgcaggatgtgaaggccatagtgacccactccatc
cacagtgccatccattctataggagggattcaggtcctcttccctctattttcacaactg
gactacagacaactcaacgacagctctgtggacaccagcgtgtgtgccaccctcctggcg
ttcctagttgagctgttgaagagctcggtggccatgcaggaacagatgctggggggaaaa
ggattcctggtgatcgggtacctgctggagaagtcgtccagggtccacatcaccagagcg
gtgctggaacagttcttgtcctttgctaagtacctggacgggttaacccacggagcgcca
ctcctcaaacagctgtgtgaccacgtcctcttcaacgctgccatctggatacacacaccc
gccaaagtccagttgtccctgtacacctacctgtctgcagagttcattggcacggcaacc
atctacagcaccatccgtcgtgtcggtaccgtgctgcagctgatgcacacgctgaagtac
tactactgggtcagcaacccactggagagcagcggcatcacacctaaaggactggatgga
ccgaggccgtcccagaaggagatcatctctcttagagccttcatgctgctgttcctcaaa
caactcatactcaaggatcggggagtgaaggaagatgagctacaaagcatcctgaactac
ctgctcaccatgcatgaggatgataatatccatgatgttcttcagttgttggtggctctg
atgtcagaacacccagcctccatgatcccagccttcgaccagagaaacggcatacgggtg
atatgtaaactcctagcctctaacagtgagaacatcagagtccaggctctcaaagtcctg
ggatacttcctcaaacacctcggacacaagaggaaggtggagatcatgcacacacacagc
ctgttcaccctgctgggagagaggctgatgatccacaccaacacagtcagcgtcaccacc
tacaacacactctatgagattctaacagaacaggtgtgtacccaggtagtccacaagcct
cacccagaacctgactccaccgtcaagatacagaaccccatgatactgaaggtggtagcg
accttgttgaagagctctagtcccagtactgaactgatggaggtcaagacactgttcctg
tctgacatgatcaaactgttcagcagcagccgagagaacagacggtgtctgttacagtgt
tcagtgtggcaggactggatgttcagtctgggttacatcaaccccaagagcccagaggaa
cagaagatgatggagatggtctataacatcttcaggatcctgctctaccacgccatcaag
tatgagtggggtggatggagggtctgggtggatacgttgtccattgctcactccaaggta
acgtacgaggcccataaggagtacctggctaagatgtacgaggagtaccagcgacaggag
gaggagaacatcaagaaggggaagaaaggttctgtctccaccatctccggcctctcggcc
acgcccgcccccgtcgtcaacggcaacctggagatccgcgagctggacgaccactcccag
agccagacccccgagagtgaggcagagtacggagagggaggagcaggaggggtctccagg
aatctgcttgctgagggaggggtcgggttgggcgtgaagggacccaacagagaggcattg
acccctggggaggaaggtcaggggtcaggcgttagggtcgaagttcatgacctcctggtg
gatatcaaggcggagaaggtggaggccacagaggtcaaactagacgacctggatctgtct
ccagaagggatggtcggaggaggaggaggagatggagggattgagaacgggcccctggtg
gaggtggactccctgctggacagcgcctacagtgccgtggtgcagaagctgaaagggaac
cacggtaacctgacatctaaagatgagacggtggtcacggggctgggcgccatggaggat
gatgggaacatgggtccgctcatcacccttgccgacgagaaagatagtgtccctagcaac
aacggattcctcttcagcaaggttgatgagaaactgcttccagcactggccaccacagac
cctctggttctgcccagcccggaccagcccaaccccttaggctctggccccgtccactcc
tccaccagtgccagcgacgacctgagtctcctagcccacatgacctcctgcaggggctca
gacctgagccatgcccagggagggctccccgaggtcgggcccttcaagatccagagcccc
ctggctgacatcagctccattgcccagagagagagccaggcagctgagatccagggctac
ccagggggagagggtccgtctggggcagatggagaggtggcagggggtaaggctggcggt
gacacagtgagcaccacgtctgatacagaaaggtctgatgatgggaaggagatgaagatc
cagaccacggccactactcaggctctccacggtcgtacggcggcccagttggaacgtgac
ctgcgtgtggacctgggcttcagagggatgcccatgacggaggagcagcgacgccagttc
agcccaggccctcgcaccaccatgttccgtatcccagagttcaagtggtcgcccatgcac
cagcgcctcctcactgacctgctgttcgccctggagacagacgtacacgtctggaggagc
cattcaaccaagtcagtaatggactttgtgaacagcaatgagaacatcatctttgtccac
aacactatacacctcatctctcagatggtggacaacatcattatcgcctgtggagggatc
ctccctctgctctctgcagccacctccccctctagttctaaggttagtacgaacaccaag
gcgggaggagaaggaggagccgactcccacaaagggtcaaagggcgaggaggtgacccct
gttccggggggcggagggacagggggagaggttgagttagagaacatggagttgacccag
ggcatgtcttcagagacggccgtgtcctttctgtctcggctcatggccatggtggacgtt
ctggtgttcgccagctccctcaacttctctgagatagaggctgagaagaacatgtcctct
ggaggtctgatgagacagtgtctacgactggtatgttgtgtagccgtgaggaactgtcta
gagtgtagacagagacagagagatagagatattggttgtctctccaagtctaacctgccc
agcagcaagtcacaggacagcctacagagctccgctgcagctagcaaggatccagacaga
cttctacaggacgttgacatcaaccgcctcagagctgtcgtcttcagagacgtggatgac
agtaagcaggctcagttcctggccctggcggtggtctacttcatatctgtcctgatggtg
tcaaagtaccgggacatcctggaaccacagagagagattggcaggtcaagcagcctatca
gggaggagcatccgccacgagatcaactcccccactagtacagagcacccgtcgtcctcc
ttttctgagggtggccggggggagaagcagactcccacctccatggaggactctccgttg
gcctctttaccccacaccgactcagggattggggaggagggccacggccctgggggtctg
aacggagccgagctgggcctggggctggggatggcaggcagggagacggacagagataga
cacagagagagggatggaggcggaggggatctactgtgtaccctgtcatcagaggttagg
aggtcaagggagagcctattggattctcctcataaccctaactccgcctccaatcttggt
caagcacctccctcgtcgatctcaagcatcagccagactaacaagggcatcaacgtcaag
gagattctgaagagccttgtggccgcgcccctggacggtggggaggcgggacaggaagtt
ggtcccaccccctaccaccctgatcccgccctcaagacacaccccatgctgcccatgcag
ttccactcattcgacaggtctgtgatggtgccagtcaagaagccccctcccggcaccctg
tcagtcaacactgtgggcacgcccaccaccagcggcgcggccacaccaggaagtacacca
aacatcttcgctgctgccacggcaacgcccaagagcatgatcaacaccacaggtgccact
gactctgcctcttcttcctcttcttcttcctcatccttcgtcaacggtgcgaccagtaag
aacctaccagccgtacagacagtggctcccttgaccgaagacaccgttgagagcatgagt
gtctattgtgaggtggagcagtgcgagctgcgcagcgggttgactcctcctgagctcaag
ccctttagctctctggcaggcttccagacagccccccgcgatgcaggacagtgtcttagt
atcaccactaagttggagcgcgccctggagaaggtggcccccctcctgagggagatcttt
gtggactttgctccgttcctctctaggaccctgttgggtagccacggccaggagctgctc
attgaaggtacaggtctggtctgtatgaagtccagtacttcagtagtagagctggtcatg
ctgctctgttctcaggagtggcagaactctatccagaagaacgctgggctggccttcata
gagctcatcaatgagggaagattgctgtgccatgctatgaaggaccacattgtgcgtgtg
gccaacgaagcagagtttatcctcaacagacagagagctgaagacgtacacaaacacgct
gagtttgagtctaactgtgcccagtacgctgctgacaggagggaggaggagaggatgtgt
gatcacctgatcagcgctgccaagcacagggaccatgtgaccgctaaccaattgaaacag
aagatactcaacatcctgaccaataagcacggggcgtggggcacgatgtcacagagccaa
ttacatgacttctggcgtctggattactgggaggatgacctgaggaggaggcggagattc
gtacggaacccctttggctccacccaccctgacgtgtcactcaaagccctggaggactat
ggtactgaggaggaggaagaggaggggctaaagtctaagaagacgttccgcagccagtca
gtggtcagtcagaacccggaggcggagcttatgctggaaggagatgacgacgctgtcagt
ctgctgcaggagaaagagatggacaacctggcaggccctgtggtgctcagtactccagcc
cagctggtttccccagtagtggtggtccacgggactctctccatcaccaccacagagatc
tactttgaggtggacgaggacgacccggccttcaagaagatccacaccaaggtcctggcc
tactccgagggtctacatggcaagtggatgttcagtgagatcagagctgtcttctccaga
agatacctgctccagaacactggtctagaggtcttcatggccaatcgcacgtctgtgatg
ttcaacttccctgaccaagctacagtgaagagggtagtctacagcctacccagggtggga
gtaggaaccagctacggactgcctcaggccaggcgtatctccttggcgacccctcgtcag
ctgtttaagtcatccaacatgacccagcgctggcagaggagggagatctccaacttcgag
tatctcatgttcctcaacaccatcgcagggaggacctacaatgatctgaaccagtaccca
gtgtttccttgggttctcactaactatgagtcagaggagctggacctcactctgcccggc
aacttcagagacctatccaagccaatcggagcgttgaacccgaagcgagctgtgttttat
gcggaacgctatgatacctgggaggaggacggaacgcctccgcatcactacggctccctc
tactctaccgctaacaccacactgctctggatgctgcggatagagcccttcaccacgttc
ttcctgaatgccaatgagaaccagtttgaccaccctgacagagccttctctggcatcgca
cgggcatggagggactgccaacgagacaccgctgacgtcaaggagttgatcccagagttc
tactaccttccagagatgtttgttaacagtagtggttttgagctgggacagagagaggac
gggactgctgtgtctgatatagaactgccagcctgggccaagaaacctgaggacttcgta
cgcatcaaccgcatggcgttggagagtgagtttgtgtcgtgccagctgcaccagtggata
gatctgatatttggttataagcagcgagggcccgaggctgtacgagctctcaatgtcttc
catttcctgtcctacgagggctccgtcactttggataccatcgccgaccccgcacagcgg
gagttgatggagacccagatccagacatgtggtcagactccatcccagctgctgatcgag
ccacacccccctcgctcctctgccatgcacctgtgttttcttcctcagagtcctctgatg
tttaaggaccagatgcagcaggatgtgatcatggtgctgaagttcccctccaactcccct
gtgacccacgtagcagccaacaccctgccccacctctctgtccctgctgctgtcaccgtc
acctgcagcaggctgttcgctgtcaaccgttggcacaacaccgtcggtctgcggggcgct
ccaggttactccctagaacaggctcatcacctgcccatagagatggaccctctcattgcc
aacaactcaggtgtgagtaagcgtcagatcacagacctggtggaccagagcatccagatc
aacacacactgcttcgtggttaccgccgacaaccgctacatcctggtctgtggcttctgg
gacaagagcttcagagtctactctaccgagacaggtaagctgacccagatagtgtttggc
cactgggacgtggtgacgtgcctggcccggtcagagagctacatcgggggggactgttac
atcgtgtcggggtccagagacgctaccctgctgctgtggtactggagcggacgccatcac
atcataggagacaaccccaacaacagtgactaccctgctcctagagctgtgctgacgggt
cacgaccatgaggtggtgtgtgtgtccgtctgcgctgagctgggactggtcatcagtggg
gccaaagagggcccatgtctggtccatactataacaggggatctgctgcgggccctggag
ggcccagagttgtgcctgaggccccgcctcatctctgtgtccagcgagggccactgtatc
atctgttatgagagaggacgcttctgtaacttcagcatcaacgggaaactactggctcag
atggaggtcaacgactctacacgggcgatcctgttgagtagtgacggtcagaacctggtg
acaggaggagacaacggggtggtggaggtgtggcaggcctgtgacttcaaacagctctac
atctacccaggctgtgacgctggcatccgcgccatggacctctctcacgaccagaggact
ctgatcacaggcatggcgtctggcagcatcgtagctttcaacatcgacttcaaccgctgg
cactacgaacaccagaacaggtactga
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integrated database retrieval system
