Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388119
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Entry
139388119 CDS
T10872
Name
(RefSeq) cysteine protease ATG4A-like isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04136
Autophagy - other
ocla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139388119
04136 Autophagy - other
139388119
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139388119
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139388119
03029 Mitochondrial biogenesis [BR:
ocla03029
]
139388119
Peptidases and inhibitors [BR:
ocla01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
139388119
Membrane trafficking [BR:
ocla04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
139388119
Mitochondrial biogenesis [BR:
ocla03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
139388119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Copper-fist
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
139388119
NCBI-ProteinID:
XP_070990792
LinkDB
All DBs
Position
29:complement(34660194..34671499)
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AA seq
413 aa
AA seq
DB search
MEAVLAKYENQINVFSEFLEDLPDTDEPVWVLGECYNAKTGKTELLSDVHSRLWFTYRKK
FSPIGGTGPSSDAGWGCMLRCGQMILAQALVCSQLGRAWRWRAQGGQPEKYHRILHCFLD
RKDSCYSIHQMAQMGVGEGKSVGEWYGPNTVAQVLKKLALFDDWNSLAVYVSMDNTVVIE
DIKKQCRQASSESRLRPRPCGWQEPFTSRETPEQACSHVDGHRATTCPHSQSHSDWRPLL
LVIPLRMGINHINPVYIQALKECFKMPQSCGVLGGKPNLAYYFIGFVGEELIYLDPHTTQ
SAVEAEAGSGVDDQSYHCLRSPRRMKITNLDPSVALGFFCKSEDDFDSWCNLVQQEIQMK
RNLRMFELVENHPPHWPPFIPPTKPEVQTTGAEFIESTDKLFESEEEFEILNV
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagtattagcaaagtatgaaaaccagataaacgtgttttcggagttccttgaa
gacttgcctgacacagatgagcctgtgtgggttttaggagagtgttacaatgctaaaaca
ggaaagacggagctactatcagacgtccactcgcggctatggtttacctacaggaaaaaa
ttctctcccatagggggaacaggcccctcttcagatgcaggctggggatgcatgctacgc
tgtgggcagatgatccttgcacaggccctggtatgctcacagctgggacgagcctggcgt
tggagggcacagggaggacagccggagaagtaccatcgtatcctccactgtttcctggat
aggaaagacagctgttactccatacaccaaatggctcagatgggagttggtgaaggaaag
tctgtaggagagtggtatggcccaaacacagttgcacaagtgctcaagaaacttgcgcta
tttgatgactggaattctcttgctgtgtatgtgtcaatggacaacaccgtggtgatcgag
gacatcaagaagcagtgtcgccaggcaagcagtgagagcagattgcggccgagaccctgt
ggctggcaggaacccttcacctctagggaaacaccagaacaagcctgttctcacgtggat
gggcatcgagccacgacttgtccacattcccagtcccattctgactggagacccctactg
ctggtcataccactccgcatgggaataaaccacatcaaccctgtctacatccaggccctc
aaggagtgttttaaaatgccacagtcctgtggtgtgctgggaggaaagcccaatctggcc
tattacttcatcggatttgtaggagaggagctgatctacctggacccccacaccacccag
tcagccgtggaggctgaggctggcagtggagtggacgaccagagctaccactgtctgagg
agcccacgccgcatgaagatcaccaacctggacccctctgtggccctgggatttttttgt
aagagtgaagatgactttgacagttggtgtaacctggtccagcaggagattcagatgaag
aggaacctgaggatgtttgagctggtggagaatcacccgccccactggccccccttcatt
cctcccaccaaaccagaggtccagaccacaggggcagagttcatcgaatcgaccgacaag
ctgtttgagtctgaagaggagtttgagatcctcaatgtgtga
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integrated database retrieval system
