Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388130
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Entry
139388130 CDS
T10872
Name
(RefSeq) U3 small nucleolar RNA-associated protein 14 homolog A
KO
K14567
U3 small nucleolar RNA-associated protein 14
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
139388130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ocla03009
]
139388130
Ribosome biogenesis [BR:
ocla03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
139388130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp14
Motif
Other DBs
NCBI-GeneID:
139388130
NCBI-ProteinID:
XP_070990812
LinkDB
All DBs
Position
29:32606102..32621506
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AA seq
849 aa
AA seq
DB search
MSPNMPAVEHALLRQRTADLTPIRHLHCTCVSSEFLVKMAKSKAARKSGENMKITSSCET
VVQGMDDEDDEELQRALADDIISASEDEGGSDDERKHCKLLEAISSLGGKKRKKLTERSE
ASIQVSEFTVNAEGEGDKINLSDLIGTLDKTPSALIKTKKQLKNLQHNQSTLETPLTRKE
TEKIQREVAFEKTSKEVSRWQSVVLQNQKAEQLVFPLNQEPSGPKRIEQVVAGWKAQTPL
EQEIFSLLRMNKQPLHDPVLTPTEEASLRAMSLEEAKIRRAELQKTRVLQSYYEAKAKRG
KKIKSKKYHRVQKKVMRKEYLKQFDEMVKTDPAAALEELKKMELSRMKERMSLKHQNSGK
WAKSKAIMAKYDDGARKAMQKQLEVNKDLTQKLVIPADEDEEDEEESAETLPDFVNDVEP
ILDQVNPWMRGKLSTEPMMEESNRLDPPVWPREVGKPGEGRDDQEEDEEQMEETEEESLL
RGFEERRKLRQTEDVKVAPMTMEENDDGKKAEILEISDDDEEAVEISDDEEALEVSDDEE
AGLSNFTSLFHGLVNHIEPPADQPKAGPGLGQGESPALLEEGLVRVRTLEDVELLSQDIS
ASDTALLTTQILGTEETDTQSATQQADKKRKKMIDPNEVLTKEAKVIEMPLAPTAVEDVE
DKEEQRVIIKEAFAGDDVISDFLKDKRKQEAAGRPKVIDLTLPGWGEWGGLGLQPSRSKR
KRFRVKVAPPPPRQDQKLPNIIIAEKRDSSIAAHQVCQLPFPFENPIQFERTIRSPVGRT
WNTQNTVQKITAPKVVTQLGAIIEPIAREDLIKDIRQAVTGPSINLESDQGPQKKRRSQQ
KKKHKRKKN
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgtccccgaacatgccagctgtggaacacgcgcttttacgacagcgtacggcagacttg
actcccatacggcatttacattgcacgtgtgtttctagcgagtttctagtcaaaatggcc
aagtcaaaagctgcacgaaagagtggagaaaatatgaagattacaagttcctgtgagacg
gtggtccaggggatggatgacgaagatgacgaggagcttcaacgtgcactggcagatgac
atcattagtgctagtgaggatgagggaggcagcgatgatgagaggaaacactgcaagctg
ctggaggccatcagctcgcttggggggaagaagaggaagaagcttactgaacggtctgaa
gcaagcattcaggtgtcagaattcacagtcaatgctgaaggtgaaggagacaaaataaat
ttgtctgacctcattggaaccttggataagacccccagtgccttaatcaagacgaagaag
cagctgaagaaccttcaacacaaccagagcaccctggagacgcccctgaccaggaaggag
acagagaaaatccaaagagaagtggcttttgagaaaacgtcgaaagaggtgtctcgctgg
cagagtgtggtcctacagaaccagaaggcagagcagctggtcttcccactgaaccaggag
ccctctggccccaaacgcatagagcaggtggtggctggatggaaggcccaaacccccctg
gaacaggagatattcagcctcctacgcatgaacaagcagcctctccatgaccctgtcttg
acacccactgaggaggcttctctcagggccatgagtctggaggaggccaagatccgtcgt
gcagaactccaaaaaaccagagtactacagtcttattatgaagcgaaagccaaaaggggg
aaaaaaataaaaagcaaaaaataccacagggtacagaagaaagtgatgcgcaaggagtat
ctaaaacagtttgatgaaatggttaagacagaccctgctgctgccttggaggaactaaag
aagatggaactgtcaagaatgaaggaacgaatgtctctgaagcaccagaacagtggcaaa
tgggccaagtccaaggccatcatggcaaaatatgatgatggggctcgcaaagccatgcag
aaacagctggaagtgaacaaagatctgacgcagaagttggtaatacctgctgacgaagat
gaggaggatgaagaggagtcagcagagaccttgccagactttgtgaatgacgtagagccc
atactggaccaggtgaatccatggatgagaggcaagctttctacagagcctatgatggag
gaaagcaaccgtttagatcctcctgtttggcccagagaagtgggaaaaccaggggaagga
cgggacgaccaagaggaggatgaggagcagatggaggaaactgaagaagaatcactttta
agagggtttgaagagaggcggaaattgcgtcaaactgaagatgttaaggttgcacctatg
actatggaggagaatgacgatgggaagaaagctgagattttagagatctctgacgatgat
gaagaggctgtagagatttcagatgatgaagaggctttagaggtctctgatgatgaggag
gctgggctctcaaatttcaccagcctgttccatgggctagtgaaccacatagagcctcca
gctgaccagcccaaggcaggcccaggtctaggccagggggagagccctgccctgctggag
gagggcctggtacgggttaggaccctggaggatgtggagctgctcagtcaggacatctct
gccagtgacacagcacttctgaccacccagattctgggcacagaggaaacagacactcag
tctgcaactcaacaggcagacaaaaagagaaagaaaatgattgatcccaatgaggttctg
accaaggaagcaaaggtcatcgaaatgccgttggctccaacagctgttgaggatgttgag
gacaaggaggaacagagggtcatcattaaagaggcctttgcaggggatgatgtcatctcc
gacttcctgaaggacaaaaggaaacaggaggcggcaggaaggccgaaggttattgacctg
acgttgcctggatggggagagtgggggggcctcggtctccaaccttctcgtagcaaacgc
aagagattccgggtaaaagttgctccacctccaccaagacaagaccaaaagctccctaac
atcataatcgcagagaagcgggattcctccattgctgcacaccaggtgtgtcagttaccg
ttcccttttgagaaccccatacagttcgagcgcaccatccgttctcctgttggccgcacc
tggaacacccaaaacacagtgcagaagatcacagcgccaaaggtcgtcacccagttaggt
gccatcattgagccaattgctcgggaggacttaataaaggacatcagacaggcagtcaca
gggcccagtattaacctggagtcagaccaaggacctcagaagaaaagacgctcgcagcaa
aagaagaagcacaaacgcaaaaaaaactga
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