Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388147
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Entry
139388147 CDS
T10872
Name
(RefSeq) cadherin-17-like
KO
K06811
cadherin 17, LI cadherin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139388147
Cell adhesion molecules [BR:
ocla04515
]
Cadherins
Major cadherins
139388147
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Cadherin_CELSR2_9th
RET_CLD1
Fibulin_C
RibLong
Motif
Other DBs
NCBI-GeneID:
139388147
NCBI-ProteinID:
XP_070990830
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Position
3:complement(10847229..10876597)
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AA seq
865 aa
AA seq
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MAHPTMHLLLLSLLIATAAGKGLEKGPLENKVLDVPEGTPVPYALYQFQASHLEVDGFRL
TGETEGKISISEDGWLYLEQTLDWAHTKTHTLELEALVGSEPVEGPVIITINVLDVNNHA
PSFNQTDYIGIVRERTPAGVPFARVFATDLDDPESPNAHLSYTLVSQIPNRDNTLFFEIN
SNTGEISTTAEGERLLKARESVIHSRGGDFSDSLKKRFDDYCTPTGDIPYELNPFYSCVQ
SAESRRLNPLEDPDFTLIVRVEDMGGESVNALNGNARVKIVVQENLWVNPGPINLREQLK
GIYPMPIGKVQSNDPSAFYRLVQKERELTFPFNVTEEGDILLTEELDREDKAMYILVVFA
EDSYGNQVDPPLEVQVVVDDVNDNAPICEEELSVFEVQENEPTGSPVGHLMVHDADDDNT
PNALLSYSLVTQTPSSVFTIDGISGRIQTKQMLQRRDATEYHLTVRVNDPGFSTECKVLI
KVIDINNELPIFEMNDYGSHNLSEDTALGHTLLTVKATDADDPGTGSSRIEFHITAGNED
GVFAMETDDNGEGRLVVAKTLNYETASSYKLQIDARNPEPLVSGLEYGAESSAVVSVAIS
DVDEAPVFDMDILDVTVPEDTKEGATLLKIDAKDPEGKEILFKMEGDTKGWLEIDPATGE
IKIKNKAVLDRETVEAFHFTVVAFEKANPELSSEREVSVRLLDVNDNVPKLTENQAFICV
KKPQPIVLTALDADADPFGAPFTFSLAQGKKSPNWDLSAVDGTSAKLTMKKSPSEDKTFL
IPINIKDTAGMGITQKFEVRVCNCTELGYCFTEPGVHAGVLGMPTTIGILVGTVGFIALV
LIIAFHRIKKDNQKKALLGETDAIL
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggcacatcccacaatgcacctgctgctgctcagcctcctcatcgccaccgctgctggg
aaaggcctggagaagggaccactggagaacaaggttctagacgtgccagaggggacacct
gtaccctacgccctctaccagttccaagcatcccacctcgaggttgatgggttcagattg
acaggagagactgaaggaaagatcagcatctcagaggacggctggctctacctggaacag
accctggactgggcccacacaaagacacatactctggagctggaggccttagtgggttca
gaaccagtggaaggtccagtcatcatcaccatcaacgtgttggatgtcaacaaccacgcc
ccgtccttcaaccagactgactacatcggcatcgtcagggaacgtacccccgcaggtgtt
ccatttgcgcgtgtgtttgctactgacctggacgacccagagtctcccaacgcccatctg
agttacaccctggtctcccagatccccaacagagacaacaccttgttcttcgagatcaac
agcaacacaggagagatttctactactgccgagggagagcgtctgctgaaggccagagaa
agtgttattcattccagaggaggggacttcagtgattctctgaagaagaggtttgatgac
tactgcacccccacaggggacatcccttatgaactcaaccccttctacagctgtgtgcaa
tcagcagagtctcggaggctgaaccctctggaagacccagacttcacgctgatagttcgt
gtggaggacatgggcggggagtcggtgaacgctctcaacggtaacgcgagggttaaaatt
gtcgtgcaggagaacctgtgggtcaatcctggaccgatcaacctcagagaacagttgaaa
gggatataccccatgcccataggcaaggtccagtctaatgatcccagtgccttctacagg
ctggtacagaaagaacgggagctgacgttccccttcaatgtcacggaggaaggagacatt
ctgctgactgaggagctggacagagaggacaaggccatgtacatcctggtggtgtttgct
gaggatagctatggtaaccaggtagaccctcccctggaagtgcaggtggtggtggacgat
gtgaatgataacgctccaatctgtgaggaggaactcagtgtgtttgaagtgcaggagaac
gaacccacaggcagcccagtcggacatctgatggtgcatgatgctgatgatgacaacaca
cccaacgcactgctctcctattcgttggtgacccaaaccccttcctccgtctttaccatc
gatggcatcagcggccgcatccagaccaagcagatgctccaacgcagagatgcaacagag
taccacctcactgtcagagtaaacgacccaggtttcagcacagaatgtaaggtcctcatc
aaggttatcgacatcaacaatgagctgcccatcttcgagatgaatgactatggtagtcac
aacctgtctgaagacacagctctaggccacaccctcctgacagtgaaagccacagacgct
gacgaccctggaacaggaagctcccgcatcgagttccacataaccgctggcaacgaagat
ggagttttcgccatggagacagacgacaatggggagggcaggcttgttgttgctaagact
ctgaactatgagactgcttcctcctataagctacagattgatgctcgtaacccagagccg
ctggtgagcggtctcgagtacggcgctgagtcgtccgccgtggtctcggtggcgatcagt
gacgttgatgaggctccagtgtttgacatggacattctggatgtcacggtgccagaggac
accaaggagggagctacgctgctcaaaatagacgccaaggacccagagggaaaagagata
ctgttcaagatggagggagacactaagggttggttggagattgatcctgctactggagag
ataaagataaagaataaagctgtgctggacagagagacggtggaggccttccactttact
gttgtcgccttcgagaaagccaatccagagctgtcctcagagcgtgaggtgtctgtgagg
ctgctggatgtgaatgacaatgtccccaagctgacagagaaccaggccttcatctgtgtg
aagaagccccagcctatagtcctgacggccctggacgcggacgcagaccctttcggagca
cctttcacattcagcctggcccagggcaagaagtcccccaactgggacctaagcgctgtg
gacggtacgtctgctaaactgaccatgaagaaatctcccagcgaggacaaaaccttccta
atccccatcaacatcaaagacaccgctggcatgggcatcacacagaagtttgaggtgcga
gtgtgtaactgcacagagctgggatactgtttcaccgagccgggcgttcatgcaggggtg
ttaggaatgcccaccaccatcggaatcctggttggaactgtcggattcatcgccctggtc
ctgatcatcgctttccatcgtataaagaaggacaaccagaagaaagccttgctgggagaa
acggacgccattctctag
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