Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388240
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Entry
139388240 CDS
T10872
Name
(RefSeq) FRAS1-related extracellular matrix protein 2a
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04512
ECM-receptor interaction
Brite
Lectins [BR:
ocla04091
]
C-Type lectins
Lecticans
139388240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139388240
NCBI-ProteinID:
XP_070990890
LinkDB
All DBs
Position
29:41540058..41783162
Genome browser
AA seq
3235 aa
AA seq
DB search
MQELQKPPPAQKPCGEGRKQHLHPLILNTGASQGHVLSPHLYSLFTHDCVAMHASNSIIK
FADNTTVVGLITNYDETAHRKEDRITTTDRTLLQNIPFKGVCVGLYPLTPTMLLFYRLIL
LAASLSGSGVAQLTDSYGLSFPLRSELSEDAILVANNGIRVPFGRSVFIDPVNDLVIQTQ
PGDRCSITVLDNQPLSQRPGQLSPKKFPCDFGPNDVTYSHFGSRSLAKDRVRLQLRYDTQ
TETVIIPFMTEVEVVFTQLEVLTKNMPLTVAKLNGVSNAIDKKILEFTYDRNSQKCKVNS
LASGSALPKYGRLVDDGLTKIMDCDEFIQSDIRYKHTFVHKSPNRDYVPMVVELCDKEGN
KVKDEYFQLMIHIKEGEANTPPKPSFMAMLMMEVSQFVMTALTTDMLAAEDLESNPDELI
FNITSPLSYEDGYIVSTDDRNLPITSFYQSDLRDLKIAYKPPSLDSDMERIFQIEFEVVD
PDVAVSDPFAFMIVVKPINSLAPVVTLNTGQLLYEGQSRPLFSTHNLEISDEDDLDSVTV
TVVDGLRHGDLTVLGLRRKYFTAADLNTGVVIYQHDGSDTYSDNIVFRMTDGKNQMEFLF
PLTIVPTDDEPPIINVNTGLVLFKNQIMAISPLMLSAADIDSEDSTIKFMIEPPFSTIGG
LLLRQSDAPEDPESWKFNAEDEVYEKEVTEWLQKDITDGKVFYKHTGPHNTDTVIDQFVF
KVHDDNDPPNESGESTFTIRVLPIDDLPPELFPGTTLQVTVQEYQLTHFGKNMLLYTDLD
SEEHDLKYTVIQPPTDTDENSPVVFGSIVLTESPDTEVNEFTQAQVNHHKISYSPPDQEL
GITAHVLQFRFSVKDTAGNSVEGAFRIFLQPFDNKPPQITNTGFSVFEQGMHVISSAELD
TSDPDTDSKQISFTLSQPPLHGQVQHAFSDLPKGGAFFLEDISDRKIIYVQNGDETVSDV
FQLDVSDGIHVVTVKVRVVVKPVDDETPAVSLPAGTVGSHMDVLENGAMEITTSVLQGWD
EDTDDLQLTFIIEKAPVFGVILVAGAHAVKFTQVDIINGLVVYAHTGGEIGLTSIMDSFN
LTLTDMSDDWSVGGNKVNGVYVRVTIIPVDNQAPEVTVGDQFIVVEGEKYAIGTQYLKAE
DKDTTSDDILCTIIVQPTSGYVENISPAPGSESSRSGTAVSAFYIRDIRVGHVYYVQSIH
KGLEPVEDRFTFRCSDGINLSKSHFFPIVIIPANDEKPEIYLREIVVMEGMNIVIDTHLL
NGADTDIPAEELTFIISKLPKHGFILNQLATGSVPVINFTLEQIREASSFIYEHDDSETT
EDSFDVILTDGKYSVERTAMVMIIGLDDETPRMLVNVGLEVEVGEAKEINNKVLKATDLD
SDDGALTYVIRFGPVQGVLQRKTPSGSLENIMIGMNFTQRDVDKRLIVYTHNGQEGICDL
VKFDVTDGMNPLIDRYFYITIRSIDMVFPDVVSKGVSLKEGGRVTLTTDLLSTSDLDSPD
ERLVFTITRAPVRGHLECTDTPWIPIVSFTQLQLAGSKVYYIHTSDDEVKMDSFEFEVTD
GYNPVFRTFRVAIMEVDNKKPVLTFHRLVITEGQSKLLTPFELTAEDQDTADLLLKFTVT
QPPAHGKLLYNHTSPVTIFTKQDLSENLISYKHDGTETSEDSFSFTMTDGTHNDFYVFSD
AVFETRRTQTMNITVVAIDNGVPQLVVNKGAPTLRILSTGHLGFLVTSTVLRALDRDSVP
ASLVFHVTTEPKHGYLINLGKGNDSIDTFSQADIDDLKICYVLRNEESATTDLFLFSVED
NGGNKLKEQQFRLDWSWISLDREHYVVDEQDTFLDVVLKRRGYLGETSFIGIGTQSGSAE
NDQDFKGHSQEQVQFIPGQTRATWRVVILADRIFEQSETFRILLSEPVMGALEFPATATV
EILGPSYESTVFIPQASYWVKEDVGEMLVPVHRSGDISQELMVICYTQQGSATGTVPSTV
LSYSDYISRPEEHASILRFDKGETEKQCGVVVIDDSLYEVEESFNVTLSLPIGGCLGAHY
ATTKVNIYPDQDDAPVFYFGEVEYRVDESDGHMEVRVLRTGTDLSKTATVTVRSRKTELA
YAEAGVDYVGISRNLDYAPGMNQQTFRVTILDDLGQPVLEGPETFELVLHMPVNGILGEP
GKTTVFINDSISDLPKVQFQEALYTGEESDGRILATVYRSGDISYKSTVRCYTRQGSAQV
ATDFQERPNTDVSIITFLPGEAAQKCVLLLVDDTVHEEEEGLRLVLGNHKSESPFGASVG
ELKETAILIKDTADKSIIKFGETEFSVSEPKEAGSVSTVKIPVLRLGDTAKLSVVRVHTK
DGSATSGEDYHPVSEDVTFKHGQTEHVVEVEVLHDGIREMTEAFTVHLKPDDNMVVETQM
TKAMVYIEETNGVADVTFPSLPQVVSLLQYDDVSKTAQDLHPPAGYPIVCVTACNPKYPD
YDKTGSICVSKHIDNTLTRYRWLVSAPAGPDGVTAPMREVDFDTFFTSSKMITLDSVYFQ
AGSRVQCTARAVNSNKDEGLELSSPIATVSLEEGMCPPRKVATVGEGPFSAKLRYTGAED
PDHPNLLKLTVIMPHIDGMLPVISTRPLSNMELTLSPDGSGNHRCSNLLDYSEVTTGHGF
ITATARNAESVGDTSPYQYSTPMRGDNTLRFYSNLNLEACLWGFTSYYNMSELLTDCGGT
IRTDGQVLNLIQSYVTLRVPLHVSYVFRSPGGAGGWQHFDLQSELRLTFVYDTATLWKDG
IGSPPQAELQGVLYPTSMRINEQGRLVVNFKTKARFRGLFVEAHSEGRIKSTAFSLSSMV
MYEDNPGLTFNLSLVRSEPTYNQPVQQWTFTSDFAVRDYSGPYRVNLIPCTTAQNMEYTV
PPVCNPGEPVPFHLDIRFQQVSEPVSVEFSLNTQIFLLSKRNLWLSDGSMGFGQESDVAF
SEGDTIYGLVMVDPVQNLGDSFFCNIEKVYLCTGVDGYVPKYNPTNFEFGCLAESPSLLY
HFKILDKAQPETQARGFGDVDFNAMLAVDDPSALSLVRQPGTDGFRLDSTAMFQVAAGRE
WFIHTIYTIRPKDNDNHGIGKRSLEYHHSLVATGNDLSITPGVKGQGHRVRRSASGLVGA
AVPDVADDIGADNNRGTNIMHIALDRTKRRAAGGVELYADRLEPRELSRGEGDEGLPTVV
GGLVVMLLTFLLIIILVLVVRYRQKEERKERVWGSASTEGMMVARMDDCSNSSEV
NT seq
9708 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagctccagaaacctcctccagctcagaaaccctgtggtgagggtaggaaacaa
catctccacccgctgatcctcaacactggggcctcacaagggcacgttctcagtcctcac
ctgtactccctgttcacccatgactgcgtggccatgcacgcctccaactcaatcatcaag
tttgcagacaacactacagtggtaggcttgattaccaactacgatgagacggcccacagg
aaggaggataggataacaacaacggaccggacacttctccaaaacataccgtttaaaggc
gtttgtgttggattatatccactgactcccactatgctactattttatagattgatcctc
cttgccgcgtcgctgtcgggtagcggcgtggcacagctcacagatagctacggattatct
ttcccgttgaggtcagaactgtctgaggatgcgatactggtggcaaataacggaatacgc
gtgcctttcgggagatccgttttcattgatcctgtcaatgatttggtgattcaaacgcaa
ccgggggaccggtgcagtatcaccgttctggataaccagccgctttcccagagacccggg
caactgtctcccaaaaagtttccgtgtgatttcggtcccaacgacgtcacctactcccac
ttcggctcgaggagcctggctaaggacagagtgaggctacagctcaggtatgatactcaa
accgaaaccgttatcatcccattcatgacggaggtagaagttgtttttacgcaactggag
gttctcaccaaaaacatgcctctgaccgttgctaaattgaacggcgttagtaatgccatt
gataaaaagattttggaattcacttatgacagaaactctcaaaaatgcaaggtaaattct
ttagcgagtggtagcgctctccccaagtacggaagacttgtagatgatggactcactaaa
attatggactgtgacgaattcattcaatctgacatccgttacaagcacacgtttgttcac
aaatcccccaacagagactatgtgcccatggttgttgaactatgtgataaagagggaaac
aaagtaaaagacgagtatttccaactgatgatccatatcaaggagggagaggcgaacact
cctcctaaacccagcttcatggcaatgctgatgatggaggtgagtcagtttgtgatgaca
gctctgaccactgacatgctggctgcggaggaccttgagtcgaaccctgatgaacttatc
ttcaacatcacctcccccctctcttatgaggatggttatatagttagcacggatgacagg
aacctacccatcacctcgttttaccagagtgacctacgggacctgaaaatagcctacaag
cccccctccctggactcagacatggagaggatctttcagatagagtttgaggtggtggat
ccggacgtggctgtctcggacccctttgcgttcatgattgtggtgaagccgattaactct
ctggcgccggtcgtgacgctgaacacgggtcagctgctttacgaaggtcagtctcgcccc
cttttctctacccacaacctggagattagtgacgaggacgacctggacagcgttacggta
accgtcgttgacgggctccgccacggcgacctcacagtcctggggttgcgcaggaagtac
ttcacggctgccgacctgaatacgggtgtggtcatctatcaacatgatggcagcgacacg
tacagtgacaacatcgtcttcagaatgacagatggcaagaaccagatggagttcctgttt
cccttgacgattgttcccacggacgacgagcctcccatcatcaatgtcaacactggtctt
gtgctcttcaagaaccagattatggctatctctcctctgatgctcagcgccgctgacatc
gactcagaagattccacgatcaaattcatgatcgagccgccattctcaaccatcgggggg
ttgctgctgaggcagtccgacgccccagaggaccccgagtcatggaagttcaacgctgag
gatgaggtgtatgagaaggaggtgacagagtggctgcagaaagacatcacagatgggaag
gtgttctataaacacaccggaccacataacactgacacagtcatagaccagtttgtgttc
aaagttcatgacgacaatgacccgcctaacgaatcgggcgagagcacgttcaccatcagg
gttctacccatcgacgaccttccccctgagctttttccaggtaccacgctccaagtgact
gttcaggagtaccagctgactcatttcggtaagaacatgcttctctacaccgatctagac
tctgaggagcacgacctgaaatatacagtgatccagccgccaacagacacagacgagaac
agcccggtggtgttcgggtccattgttctgactgagagccccgacactgaggtcaacgag
ttcacgcaggctcaggtcaaccaccacaagatatcctacagtcctccagaccaggagctg
ggcatcacggctcacgtcctccagttccggttctccgtcaaagacacggccgggaatagc
gtcgagggggctttcaggattttcctgcagccatttgacaacaaaccaccacagatcact
aacactggcttttctgtgtttgagcaaggcatgcatgtgatatccagtgctgagttggac
acatcagacccagacacagacagtaaacagatatcgtttaccctcagccagcctccgctg
cacggccaagtccagcatgccttctcagacctacccaaagggggagctttcttcctagag
gacatctcggacaggaagatcatatacgtccaaaacggcgacgagacagtgagcgacgtg
ttccaacttgacgtcagcgatgggatccatgttgtcacggttaaagtcagagtcgtcgtg
aagcccgttgacgacgagacgccagctgtcagtttaccggccgggacggtcggttcacat
atggacgtcctagagaatggagctatggagatcactacgagtgtcctccaggggtgggac
gaggacaccgacgacctccagctgaccttcatcatcgagaaagcccctgtgtttggtgtc
atcctggttgccggggcacatgccgtgaagttcacccaagtcgacatcatcaacggttta
gtggtgtatgcccacaccggcggagagattgggctgacgtccatcatggacagcttcaac
ctcaccctaactgacatgtcagatgattggtcagtgggcggaaacaaggtcaacggtgtc
tacgtccgtgtcacaatcatccccgttgacaaccaggcccctgaggtaaccgtgggtgac
cagttcatcgttgtcgaaggagagaagtatgccatcggaacacagtatttaaaggccgaa
gacaaagacacaaccagtgatgatattctctgcaccatcatcgtccagcccacgtctggt
tatgtggagaacatctccccagctcctggatcagagagttcacggtcagggacggcagtc
agcgccttctacatcagagacatcagagtaggacatgtatattatgttcagagtatccac
aaggggttagaacccgtagaggacaggttcacatttagatgctccgacggtatcaactta
tcaaaaagtcatttcttccctattgtgattattccggctaatgatgaaaagccagagatt
tacttgagggagatagttgtgatggaggggatgaatatagtcatagacactcatctcctg
aacggagcagacactgatatcccagcagaggagctgactttcatcatctccaaactgccc
aaacacggctttatcctcaatcagctagccacaggctcagtcccagtcataaacttcacc
ttagagcagattagggaagcttccagtttcatctacgaacatgacgactctgagaccacc
gaggacagctttgacgtcattctaacagacgggaaatattcagtagagagaaccgccatg
gttatgatcatcggcctcgacgacgagacgccgagaatgctggttaatgttggtctggag
gtggaagtaggtgaggcgaaagagatcaacaacaaggtcctcaaagccaccgatctagac
tcggacgatggagcgttgacctatgtgatccgcttcggtcctgttcagggtgttctacag
aggaaaaccccatctggttctctggagaacatcatgataggcatgaatttcacacagagg
gatgtagacaaaaggttgatcgtttacacacacaacggtcaggaaggcatctgtgacctg
gtcaagttcgacgtcactgacggcatgaaccctctgatcgatcgttacttctacatcacc
atcaggagcatcgacatggtcttcccagacgtggtcagcaagggagtctctctgaaggaa
ggcggtagagtgacattgaccacagatcttctcagtactagcgatctcgacagtccagat
gaacgtttggtgttcaccatcaccagagctccagttagaggacacctggagtgtactgat
acaccatggatccccatcgtgtcattcacccaactccagctggctggcagtaaagtctac
tacatccatacctcggacgacgaagtcaagatggacagttttgagtttgaggtaaccgat
ggttacaacccggtgttccgtactttccgagtcgctatcatggaagtggataacaagaaa
ccagttttaacgtttcacagactcgtgatcaccgaggggcagagtaaactcctcacgcca
ttcgagctgaccgcagaggaccaggacacagctgacctgttattgaagttcaccgtcacc
caaccaccagcgcatggaaaactcctctataaccacacctcaccggtcaccatcttcacc
aagcaagacctcagcgagaaccttatcagctacaaacacgatggcaccgagacctccgaa
gattccttctcatttactatgaccgacgggacgcacaatgacttctatgtgttctccgac
gcggtgttcgagacacggcgcacacagacaatgaatatcacggtggtggccatagataac
ggtgtccctcagctggtggtgaataagggcgcaccgacactgaggatcctgtccacgggg
cacctggggttcctcgtgacctccacggttctacgggcgttagacagggacagcgttccg
gcttccttagtgttccacgtcaccacggaacccaagcatggttacctcatcaatctgggc
aaagggaatgactccatcgacaccttcagtcaagctgacattgatgacctaaagatctgc
tatgtgttaagaaatgaagagagcgcaaccacagacctcttcctcttctctgttgaagac
aacggtggaaacaagctgaaggagcagcagttccgtctggactggtcctggatctctctg
gatagagagcactacgttgtggacgagcaggacacgttcctggacgtggtcctcaaacga
cgagggtatctgggagaaacctccttcataggtattggtacccagagcggcagtgcggag
aatgaccaggactttaagggtcactcccaggagcaggtacagtttatccctggccagaca
cgtgccacgtggcgtgttgtgatccttgccgacaggatctttgaacagtctgaaaccttc
cggatccttctgtctgagcccgttatgggagcactggaattccctgccaccgccacggtg
gaaatactgggcccttcctacgagtccacagtgttcatccctcaggccagttactgggta
aaggaggatgttggagagatgctggtacctgtccacaggagtggagacatcagccaggaa
ctcatggtgatctgctatactcagcagggttcagccactggcaccgtcccctctacagtc
ctgtcctactccgactatatttccaggccagaggagcacgccagcatcctgcgcttcgac
aagggagagacggagaaacagtgtggcgtggtcgtcattgacgactccctgtacgaggtg
gaggagagcttcaacgtaacgctgtccctgcccatcggagggtgcctcggtgcacactac
gccaccactaaagtcaacatatatccagaccaagatgatgctccagtgttctactttggc
gaggtagagtaccgtgtggatgagagtgatggtcacatggaggttagagtgttgaggaca
ggaacggatctgtccaagactgctaccgtcactgtgcgctcacgcaagacggagctggcc
tatgcagaggctggtgtggactacgtagggatcagtcgtaacctggactatgccccaggg
atgaaccagcagaccttcagggtgacaatcctggatgacctgggtcagccggtgctggag
gggccagagaccttcgagctggtcctccacatgccggtgaatggcattctgggagaacct
ggcaagaccaccgtcttcatcaacgactccatctccgacctgcccaaggtccagttccag
gaggcgttgtatacgggggaggagagcgacggtcgtatcctggcaacagtgtaccgtagt
ggtgacatcagctacaagtccaccgtgcgctgctacacccgacaggggtcagctcaggtc
gccacagacttccaggaacgaccaaacacggacgtttccatcatcaccttcctgccaggg
gaggcggcacagaagtgtgtgttgttgctggtcgatgacacagtccacgaggaggaggag
gggcttcgactggtcctggggaaccacaagagcgaatcacctttcggggcgtcggtcggg
gagctgaaggagaccgccatcctgattaaagatactgctgacaagtctatcatcaagttt
ggagagaccgagttcagtgtgagtgagcccaaggaggcaggctctgtttccacggtgaag
attccagtgctgcgattgggcgacaccgccaagttgtcagtggtccgagttcacaccaag
gacgggtcagctacctcaggagaggactaccatcctgtctcagaggatgttacctttaag
catgggcagacggagcacgttgtagaggtggaggtgttgcatgacggaatcagagagatg
acagaagccttcaccgttcacctgaaacctgacgacaacatggtggtcgaaacgcagatg
actaaggccatggtgtacattgaggagaccaacggtgtggccgacgtcaccttcccctcc
ctgcctcaagtggtgtctctgctgcaatatgacgacgtcagcaagacagcacaggacctc
caccctccagctggctaccccattgtctgtgtcaccgcctgtaaccctaagtaccctgac
tacgacaaaacaggctctatctgtgtcagcaagcacatcgacaacacgctgacacgctac
cgctggctcgtcagtgcccctgctggtccggatggggtcactgcacccatgagagaggtg
gactttgataccttcttcacctcctccaagatgatcaccctggactctgtctacttccag
gccggatccagggtgcagtgtactgccagggccgtcaactctaacaaagacgagggactg
gagctcagcagtcccatagctactgttagtctggaggaaggtatgtgcccacctcgtaag
gtggccacggtgggcgaagggcccttctctgccaagctacgctacaccggagcagaggac
ccagaccaccccaacctccttaaactcactgttatcatgccacacatcgatggcatgcta
ccggtcatctcaacccgtcctctgtctaacatggagctcaccctcagccctgacggttct
ggcaaccaccgttgctccaacctgctagactacagcgaggtcaccacgggtcacgggttt
atcaccgcgacggcgaggaacgcggagagcgtgggcgacacctccccctaccagtacagc
accccaatgcggggggacaacacattacgtttctatagtaacctcaacctagaggcctgc
ctatggggattcaccagctactataacatgtctgaactactcaccgactgtggagggacc
atcaggacagacggacaggtgctgaatctgatccaatcctacgtgactctgcgtgttcca
ctgcacgtgtcatacgtgttccgctccccagggggtgcggggggctggcagcattttgac
ctgcagtctgagctccgcctcacctttgtgtacgatactgccacactgtggaaggacggc
atcgggagcccaccgcaggctgagttacagggtgtcctgtaccccaccagtatgcgtatc
aacgagcagggtcgtctggtggtcaacttcaaaaccaaggctcgcttcagaggtctgttt
gtcgaggcccactcggaaggcaggatcaagagcacagcattctctctgtcatccatggtg
atgtatgaagacaaccctggcctgacctttaacctcagcctggtgaggagtgaacccacc
tacaaccagcctgtccagcagtggacattcacatcagactttgctgtgcgtgactattct
ggtccatacagagtgaatctgattccctgtactacagcccagaacatggaatacaccgtc
ccccctgtctgtaaccccggagagcctgtccccttccacctggacatacgcttccaacag
gtcagtgaaccagtatcagtggagttcagtctcaacactcagatattcctgctgtccaag
aggaacctgtggctgtctgacggatccatgggcttcggacaggagagcgacgtggccttc
tcagagggtgatactatctacggtcttgtgatggtggaccctgttcagaacctgggggac
tcttttttctgcaacatagagaaggtgtacctgtgcaccggcgtggatggatacgtaccc
aagtacaaccccactaactttgagtttggatgtctggctgaatctccctctctgctctac
cacttcaagatcttagacaaggcccagcccgagactcaggcccgtgggtttggtgatgtg
gattttaatgcaatgttggctgtagacgacccctcagctctctctctggtcagacagcct
gggacagatggattcagactggactctacggccatgttccaggtggctgcgggtcgtgag
tggttcatccacaccatctacaccatccgccccaaagacaacgacaaccatggcatcggc
aagaggagcctcgagtaccaccactccctggtcgccacgggcaacgacctctccattacc
cccggggtcaaaggtcaaggtcaccgtgtgaggaggtcagccagtggattggtcggagcg
gcggtccccgacgtggccgatgacattggagcagacaacaaccgcggcaccaacatcatg
cacatcgccctggaccgtaccaagaggagggcagcggggggggtggagctgtacgccgac
cgtctggaaccaagggagctgagcaggggggagggggacgaggggttgccgacggtggtg
ggggggttggtggtaatgctgcttaccttcctcctcatcatcatcctcgtcctggtggtc
cggtacagacagaaggaggagaggaaagagagggtgtgggggtcggcgagcacggaaggg
atgatggtggcgaggatggacgactgcagcaacagctcagaggtctaa
DBGET
integrated database retrieval system
