Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388258
Help
Entry
139388258 CDS
T10872
Name
(RefSeq) neuregulin 2a isoform X1
KO
K05456
neuregulin 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04012
ErbB signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
139388258
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139388258
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Growth factors (RTK binding)
139388258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neuregulin
I-set
Ig_3
ig
Ig_2
V-set
EGF
DUF4131
DUF6377
Ig_5
EGF_2
Motif
Other DBs
NCBI-GeneID:
139388258
NCBI-ProteinID:
XP_070990910
LinkDB
All DBs
Position
29:33221359..33401617
Genome browser
AA seq
710 aa
AA seq
DB search
MRLDSVHLSMLVIGVSFACYSPSLNSLQDQAYNSAVVIEGKVQSAPLNDSVEAYSVNVKV
LDLWPRNSGGLEREQLVTVGEFGSEALCTTVIKNHKYIFFMDPTDEPLVFKASYAPIDTR
GNNLKKDVGRILCENCANAPKLKRLRNLMVEEGSRLTVKCEATGNPSPTYKWFKDGSELK
KSREVKIKSSQKNSRVQISRAKLEHSGNYTCVAENLLGNSNSTSTVHVQSITTTPSPGSG
HARRCNDSEKAYCVNGGDCYFIHGINQFSCKCPDGFFGQRCLQTEPLRLRMPNPYKKAEE
LYQKRVLTITGICVALLVVGIVCVVAYCKTKRQRKKMHNHLQQNMCADHPNRNLANGPNH
PGPGPEEIPMVDYISKNVPATERVIGHVPEDSFPGSHASSRSHNSSTHAHSSTHRHEERT
WSLERTDSVLSDSPGMMSSSVGTSRCNSPACMEARARRAAHCGSTVPHRPGLQYEDSFDS
LGDSPHSDRYVSALTTPARLSPVDFFYSLSPQVPSFQITSPNTSQAMSLPPAAHTPYPPE
DDQPLLRRYQVPLHDVQRREPYRQQRRTYLNDSTGSLPSSPYRLAEEEDYETTQEYLSSR
EQPKKSGTGSGGVGGRRLRRSRQNGYVAPRGYEASRDYGSRSCLMDSESEGEGESTPFLS
MQNMNAEPSTICRPANSRTSQSHSSGQHGARGTVQTRQTHSRSKPDNVPH
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttgattcagtacatttatccatgctggtcatcggggtctctttcgcctgctac
tccccgagtttgaattctctgcaggaccaggcttacaattccgccgtggtgatcgagggc
aaggtgcagtccgcgcctctgaacgactcagtcgaggcgtacagtgtgaatgtcaaagtg
ctggacttgtggccgcggaacagcggaggtctggaacgggagcagctcgtcaccgtgggg
gaattcggatcggaggctctttgcaccacagtgataaagaatcacaagtatatttttttc
atggacccaactgatgagcctctggttttcaaggcgtcgtatgctcccatagacactcgt
gggaataatctaaaaaaagatgttggaaggatcttgtgtgaaaactgcgctaatgcccca
aagttgaagcggttgaggaacctgatggtggaagaggggagcaggctcacggtcaagtgt
gaggctacaggaaaccccagccctacctacaaatggttcaaagatggcagtgagctcaag
aaaagcagagaggtcaaaataaagtccagccagaagaactccagggtccagatcagcaga
gccaagctggagcattctgggaattacacgtgtgtggcagagaaccttctggggaactcc
aactccacgagcactgttcatgtccaaagcataactaccacaccgtctccaggctcgggc
catgccagaagatgcaatgactcagagaaggcctactgcgtgaacggcggcgactgttac
ttcatacatggtatcaatcagttctcctgcaaatgtccagatggattcttcggccagcgg
tgtttgcaaacagagccgctgcggttgcgcatgcccaatccttacaaaaaagctgaagag
ctctaccagaaaagagtcctgacaatcacggggatctgcgtggctctgctggtggtgggc
attgtgtgtgtggtggcctactgcaaaaccaagagacagaggaagaagatgcacaatcac
ctgcagcagaacatgtgtgcagatcacccaaaccggaacctagcgaacggacccaatcac
ccaggacctggccctgaggagatacccatggtagattacatctctaagaatgtgcctgca
acggagcgagtcatagggcatgtaccagaggactcgttcccaggcagccatgcgtcttcc
agatctcacaactcctctacccatgcccattcatccactcacagacacgaggagcggaca
tggagcctggagcggactgacagtgtcctctcagactcaccaggcatgatgtcgtcctcc
gtggggaccagtaggtgcaacagtcctgcgtgcatggaggccagggccaggcgtgccgca
cactgtggctctactgtgccccaccggccgggcctgcagtacgaagactcgttcgattcg
ctgggggactctccacacagcgacaggtatgtgtcagccctgacaacgccggcccgcctg
tctccagtggacttcttttactcgctgtccccgcaggtgccttccttccagatcacctcc
cccaacaccagccaggccatgtccctgccacccgccgcccacaccccctaccccccggag
gatgaccagcctctgctgcggcgctaccaggtgcccctgcatgacgtccagcgccgggag
ccctaccggcagcagcgccgcacctacctgaacgacagcacgggcagcctgccctctagt
ccctacaggctggctgaggaagaagactacgagaccacacaggagtacctctcctcccgt
gaacaaccaaagaaaagtgggaccggcagcggtggtgttgggggtcggcgcttgcggcgg
tccagacagaacggctacgtagcgccgagaggatacgaggcgtcacgggactacggctct
cgcagctgcctgatggacagcgagtcggagggggagggtgagagcacgcccttcctcagt
atgcagaatatgaatgcggagccctccaccatctgcaggccggcaaacagtaggacttct
cagtcacactcttcggggcagcacggtgcacgtgggactgtacagaccagacagacgcac
tcacggtccaaaccggacaatgtaccgcattaa
DBGET
integrated database retrieval system
