Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388273
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Entry
139388273 CDS
T10872
Name
(RefSeq) spartin a isoform X1
KO
K19366
spartin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139388273
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Gene cluster
GFIT
Motif
Pfam:
Senescence
MIT
Motif
Other DBs
NCBI-GeneID:
139388273
NCBI-ProteinID:
XP_070990941
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Position
29:complement(40578891..40594957)
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AA seq
626 aa
AA seq
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MSLAEPAELLLIRDQYDRALECLTRGLAADQAGQGAQALELYRRGRQHLTLGLEVPTRGP
QNQGAPWDTARQLQQKMRETLTNISTRLANMETAGVGTAGQGGPALVDLVDLSSQCLYPT
LGPLVPPMPLPGSSNPLPHLYPTLPPGATPTDSLSAGATGITMAPSLPILPALPLGLPGE
QPPAYTPQPTDGHHSLAYSPAGGGGLGLGGQRVGGPPQPEGGVGGDGEELLFLPRGVQMF
FVSSDGQVSAPSYPGYLRIIRFSSQLKDMANGGASAFLHVCDWLYPLTPDTPVLLSTSGI
FMFPDTMAGIPGSYVGVVLSSELPAADRHAFQDLLSQLTELRVQAPEEGAGSEIMNLSEK
VPIGPPVEVAGAGTGEEELPLPEWSEKMSQGILAGASWLSKGFVRGAEATGKAIQKGASK
LREHITPENVPAEVSPGVTKGLHHAKQATGGAVRVSQFLVDGVCTVVGCVGEKLAPHVKK
HGSKLIPESMKNTKDGRSNLDGAMVVAVSSIKGLSAMWTGLETGAKNIGKSVTSETVMTV
KHKYGDDVSKATDTGIQSVINVGVAAFNVDNLGIKGVLKTAGKQTAKAVVRERNDTPQVA
VGDHNHNGGPEEKEMWERKKDEDDKK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttggcagagccagcagagttgctgctgataagggaccagtatgaccgtgcgttg
gagtgtctgaccaggggcctggcggctgaccaggcagggcagggggcccaggccctggag
ctgtacaggaggggacggcagcacctaaccctgggcctggaggtccctaccagggggcca
cagaaccagggagccccctgggacacggccaggcagttgcagcagaagatgagggagact
ctaactaacatcagcacccgactagcaaacatggagacagcaggggtggggacggcgggc
cagggaggcccagcgttggtggatctagtggatctctcttcccagtgcctctatcccacc
ctggggccattggtgccccctatgccgctgcctggttcctccaaccccctcccccatctc
taccccacactgccacccggggctaccccaacagacagcctctctgccggggctacaggc
atcaccatggccccctccctgcccatcctccctgccctgcccttggggctcccaggagaa
cagcccccagcctacaccccccagcccaccgacgggcaccacagcctggcttatagccca
gccggaggagggggtctggggctgggggggcagagggtggggggacctccacagcccgag
ggaggggtagggggggacggagaggagcttttgttcctccctcggggggtgcagatgttt
ttcgtgtcgtcggatggccaggtgagcgccccatcgtacccgggttatctacgcatcatc
aggttcagcagccagctcaaagacatggccaacggaggagcatcagccttcctacacgtg
tgtgactggctgtaccccctgactccagacaccccagtgcttctgtctacctctgggatc
tttatgtttcctgacaccatggcggggatacccgggtcctacgtaggggttgtgctgtcc
tctgaactgcctgcagcagacagacatgcctttcaggacctcctctcacaactcactgag
ctacgggtacaggctccagaggagggggcagggtcagagatcatgaacctgagtgagaag
gttcccattggtccccctgtggaggtggcgggagcagggacaggggaggaagaactcccc
ctacctgaatggagcgagaagatgtcccaaggcatcctggcaggtgcatcgtggctgagt
aaagggtttgtgcgtggagcggaggccacaggtaaggccatccagaaaggagcgtctaag
ctgagagaacacatcaccccagagaacgtcccggctgaggtcagccctggtgttaccaag
ggcctgcaccacgcaaaacaggccaccgggggcgctgttcgcgtcagtcagttcctggtg
gacggagtgtgtaccgtagtaggctgtgtgggggagaagctggctcctcatgtaaagaaa
catggcagtaaacttatccctgagtccatgaagaacactaaagatggccgctccaacctg
gatggcgctatggtggtggcagtcagcagcataaagggtctctccgctatgtggactggt
ttggaaactggagctaagaacatcggcaagagtgtcacctctgagacggtcatgaccgtg
aagcataagtatggcgatgacgtgagcaaagccacggacacgggcatccaatcagtgatc
aacgtgggcgtggccgcgttcaacgtggacaacttgggtatcaagggtgtcctgaaaacc
gccggaaaacagacagctaaagctgtggtcagagagcgaaacgataccccgcaggtcgca
gtcggagaccacaaccacaacggaggaccagaggagaaagagatgtgggagaggaagaag
gatgaggatgacaagaaatag
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