Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388300
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Entry
139388300 CDS
T10872
Name
(RefSeq) complement component C6-like
KO
K03995
complement component 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
139388300
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Gene cluster
GFIT
Motif
Pfam:
MACPF
Kazal_C6
EGF_C8A_B_C6
Ldl_recept_a
TSP1_spondin
Sushi
TSP_1
Brix
Motif
Other DBs
NCBI-GeneID:
139388300
NCBI-ProteinID:
XP_070990999
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Position
29:18739026..18757254
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AA seq
941 aa
AA seq
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MDRTNSLLVLLHVLGSVTVSLGCFCDHYAWSSWSTCTRTCNYGTQERRRSIRYDDYYWKN
SCEQLCQKHESRACNVQACFIHCQLTDWANWSGCSPCAKKQLRTRSLLRPSQFGGVECDA
VLTEDRACYPSTECKMETLNCKEFQCGNGRCISSKLTCNKQNDCGDNSDEKNCDEFKIVC
PVEKRVVPGADLIGNGFDAMAEAMRGAVLDNMFMGDTCNLNRSRGSSYRLYYRVPANVES
FEIKVEIPDDFKQEPQPVYSETVNLASPPVSTRSDSSSGDSSLIWVPIFFFGSRRHHQSN
TDTFKQAISASKKTDSQFFRVHQVLPVSRFRVKDSDLYLTEPFLQFLTSLPLEYNYALYR
EIFKHFGTHYFASGTLGGHYDLLYQYSRLELKNSGLTEEHTKGCLKSESSMFIIIYSQSS
NVVRCSDNTMTQKHEGSFVQSSEKSFSMVRGGRTGEAAALAWEQKGAAPDSTTYKNWAKS
LIDNPAVVEYELLPIINLVKGIPCAATKRRHLTRALVEYLEDFDSCKCAPCPNNARAVLS
GTDCQCICQTGTYGPNCEQRAQDYTSEAVDGYWSCWGTWSACDASMKRHRTRECNNPAPL
RGGKLCQGPARQEEGCFISIFQEQNVCVNDEDFATEGRAEGLPPGVEGCPRPKRPANSHL
RKDKRYYEFGDMEEFLCFTGFEMEGYQFINCRPDGTWTPPTGMCIRKVCSPPAVPEGMTL
YPSKKEYKVDHSVGLECTERGMVPSEQGFYTCAKSLTWEPPLPKDLHCKIDKPFVPDNQC
GRGERHVGSKCICVARETCLPYKTEFCIFNAEVGSGVMMSYCGFHSARCHGDQLFFMNVG
PCDEDVVSLDWAKFRVSMAAKSSVQEPCDSDTCYEWESCTESKQCLCKVPRDCPKEGEHM
FCVKLLKTQSKRSVNLCFMAAIKCRKMEFEILNEGLCEEST
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtaccaacagtctcctggtactgctgcatgtcctgggttcagttacggtcagc
ctgggctgcttctgtgaccactacgcctggagctcatggtccacctgcaccagaacctgc
aactacgggacccaggagcgccgcaggagtatccgatatgatgactattactggaagaat
agctgtgagcagctgtgtcaaaagcatgagagtcgggcatgtaacgtccaggcctgcttc
atccactgtcaactcactgattgggccaactggtccgggtgctccccgtgtgccaaaaaa
cagttaaggactcggtcactgctaaggccttcccagtttggaggcgtggagtgcgatgct
gttctgacagaagacagagcgtgttacccatcaacagagtgcaagatggaaacactcaac
tgcaaagagtttcagtgtggcaatggtcgctgtatcagctccaaactaacatgcaataaa
cagaacgactgtggggacaactcagatgagaagaactgtgatgaattcaaaatagtgtgt
cctgttgagaagagagtggtccctggagctgacctcataggaaacgggtttgatgccatg
gcagaggctatgaggggtgcggtactggataacatgttcatgggggacacctgcaacctt
aacaggagcagaggcagcagctacaggctgtactaccgcgtcccagccaatgtagaaagc
tttgagatcaaggtcgagatcccagatgactttaaacaggaaccccagccagtctacagt
gagaccgtcaacctggcctccccaccagtctctaccagaagtgattcctccagtggtgac
tctagtttaatctgggtcccgatcttcttctttggttccagacgccaccaccaatccaac
acagacacattcaagcaggctatttcagcttcaaagaagacggactcccagttcttccga
gtgcaccaggtgttacctgtatccagattcagggtgaaggattcagacctgtacctgaca
gagcccttcttacagtttctgaccagcctgcccctggagtacaactacgccctctacagg
gagatcttcaagcactttgggacccactacttcgcctccggaaccttagggggacactat
gatctgctttaccaatacagcagactggagcttaagaacagtggtttaacagaagagcat
accaaaggatgcctaaagtctgagtcgagcatgtttataataatatactcgcaaagttca
aatgttgtaagatgctccgacaatacaatgactcaaaaacatgaagggtctttcgtgcag
tcgtcagagaagtctttctccatggtgcgtggaggcaggaccggagaggctgcagccctg
gcctgggagcagaaaggggctgcccctgacagcaccacttataagaactgggccaaatca
ctcatagacaaccctgctgttgtggaatatgagctgttgcccatcatcaatctggtcaag
gggatcccatgtgctgccactaaaagaaggcacctgaccagagctctggtggagtacctg
gaggactttgactcctgcaagtgtgccccctgccctaacaatgcccgtgccgtcctttct
ggcacagactgtcagtgcatctgccagacgggcacctatgggcccaactgtgagcaacgg
gcgcaagactacacctcagaggcagtagatggttactggagctgctgggggacatggagt
gcctgtgatgcatccatgaagagacatcgtaccagagagtgcaacaaccccgctcccctg
agggggggaaaactctgccagggaccggccagacaggaggagggatgcttcatctccatt
ttccaagagcaaaatgtatgtgttaatgatgaggactttgccacagaggggcgggcggag
ggcttgcctcccggcgtggagggctgtccaagacccaagcgtcctgccaacagtcacctc
aggaaagataagcgttactatgagtttggcgacatggaggagttcctgtgcttcacaggg
tttgaaatggaaggttaccagttcatcaactgtcgccctgacgggacctggacccctccc
acagggatgtgcatcaggaaggtgtgctccccgcctgccgtgcctgagggtatgactctg
tacccctccaagaaggagtacaaggtggaccactccgtgggacttgaatgcacggagaga
ggcatggttccgtcagaacagggcttctacacctgtgccaagagtctaacctgggagcct
ccacttcctaaagacctgcactgcaaaatagataagccatttgttcctgacaatcaatgt
gggagaggagagaggcacgttggatccaaatgtatctgcgtggcacgtgagacatgcctc
ccatacaaaactgagttctgcatcttcaatgctgaagttggcagtggtgtgatgatgtct
tactgtggtttccactcggcccgttgccatggtgaccagctcttcttcatgaatgtgggc
ccgtgtgacgaggatgtggtcagcctggactgggccaagttcagggtcagcatggctgcc
aagagctcagtccaggagccctgcgactctgacacctgctatgagtgggagagctgcact
gagtccaaacagtgtctgtgtaaagttccccgggactgtcctaaggagggagaacacatg
ttctgtgtgaagctgctgaagacccagagcaagaggagtgtgaatctgtgtttcatggct
gccatcaagtgtagaaagatggagtttgagattctcaacgaaggcctgtgtgaggagtcc
acataa
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