Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388304
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Entry
139388304 CDS
T10872
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56 isoform X1
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Enzymes [BR:
ocla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139388304
Ribosome biogenesis [BR:
ocla03009
]
Eukaryotic type
Pre-60S particles
Helicases
139388304
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NCBI-GeneID:
139388304
NCBI-ProteinID:
XP_070991004
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Position
29:9275392..9283081
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AA seq
559 aa
AA seq
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MATDRLQFHEMGIDDRILKALADLGWAQPTLIQEKAIPLALEGKDILARARTGSGKTAAY
AVPVIQRILTSKQNVREQAVRVLILVPTKELGQQVQAMIRQLTAYCARDVRVADISGKAD
LSAQRPILMEKPDVVVGTPSRVLAHLSAQSLDLQASLETLVIDEADLLFSFGFEADLKSL
LCHLPKIYQSFLMSATLSEDVQALKELLLHNPVILKLQGSQLPDSSQLQQYSVQCEEEDK
FLLIYTLLKLHLVQGKTLVFVGAVERCYRLKLFLEQFSIPTCVLNSELPVHSRCHIITQF
NQGFYDYIIATDEQVLADPTTTAQAAEGKGKKKKKNAGRAKDKEYGVSRGIDFQNVSNVI
NFDFPTTVESYIHRVGRTARADNPGTALTFISHTELPLLAEVEDALIGDNTECALKPYGF
KMEEIEGFRYRCRDAMRSVTKQAVREARLKEIKQELLNSEKLKTYFEDNPRDLQLLRHDK
DLHPAVIKPHLKNVPEYLIPPTLRGVANPMSGRKRRRREKPKPDGVVKTTFKKDFRSKNP
LKSFHYTGGRSRGGKAGKS
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgacaggctgcagttccatgaaatgggcatagatgatcgcattttaaaggcg
ctggcggacttgggctgggctcagcccactttgatccaggagaaagccattccactggcg
ctggagggcaaggacattctagcccgggccaggactggctcaggaaaaacagctgcttac
gctgtgcccgtcatccagcgtatcttgacatccaaacaaaatgtccgtgagcaggcagtg
agagtgttgatcctggttcctaccaaggagctggggcagcaggtacaggccatgatccgc
cagctgactgcctactgtgccagagacgtgagggtggcagacatctccggcaaggctgac
ctgtctgcccagaggcccatcctgatggaaaagccagatgtggtagtggggaccccctct
agggttctggcccacctcagtgcccagagcctggacctgcaggcctcgctggagaccctg
gtcatagatgaggctgacctgctcttctccttcggcttcgaggccgacctcaagagcctg
ctatgccacctgccaaagatctaccagtccttcctaatgtcggctactctcagcgaggat
gtccaggccctgaaggaactgctgctgcacaatcctgtgattttaaagctgcagggctcc
cagctgccagacagctcccagctgcagcagtacagtgttcagtgtgaggaagaggacaag
ttcctgctcatctacaccctgttgaaactgcacctggttcagggcaagaccctggtgttt
gttggggcagtggagaggtgctacagactcaaactgttcttggaacagttcagcatcccc
acctgtgtactcaactctgagctgcctgtccactccaggtgtcacatcataacccagttt
aaccaggggttctatgattacatcatcgccacggacgagcaggtattggctgatcccacc
accacagcgcaggctgccgaggggaaagggaagaagaagaagaagaatgcagggagagcc
aaggacaaggagtacggcgtctccagaggaatcgacttccagaatgtctccaacgtcatc
aactttgacttccccaccaccgtggagtcctatatccaccgtgttggacgaacggcacga
gcagacaacccaggcaccgctctcaccttcatctcacacacagagctccccctgctggca
gaggtggaggacgcactcattggcgataacactgagtgtgctctgaagccgtacgggttt
aaaatggaggagattgagggcttcagataccgctgccgggatgccatgaggtcagtaact
aagcaggcggtgagggaggccagactgaaagagatcaaacaggagctgctcaactcagag
aaactcaagacgtactttgaggacaacccccgagacctgcaactgctgaggcacgataaa
gacctgcaccctgctgtcatcaagccacacctgaagaacgtaccagaatacctcatccct
ccgacgctgaggggagtggccaacccaatgtccggcaggaagaggaggaggagagagaag
cccaaacctgacggggtcgtcaagacgacctttaagaaggacttccgaagcaagaacccc
ttgaagagtttccactacaccggggggaggagccgagggggcaaggctggcaaatcctag
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