Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388315
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Entry
139388315 CDS
T10872
Name
(RefSeq) farnesyl pyrophosphate synthase-like
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00900
Terpenoid backbone biosynthesis
ocla01100
Metabolic pathways
Module
ocla_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
139388315
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ocla01006
]
139388315
Enzymes [BR:
ocla01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
139388315
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
139388315
Prenyltransferases [BR:
ocla01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
139388315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Pfc11_Rna14-15-ID
MAAL_C
Motif
Other DBs
NCBI-GeneID:
139388315
NCBI-ProteinID:
XP_070991023
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All DBs
Position
3:13652367..13656399
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AA seq
357 aa
AA seq
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MGDSSCSNGTHHSGAAQSDPQLFEAQFEELVIELTEQDLTDSVLADALNRLREVLHYNTP
GGKRNRGLSVIGSLRELVPPTELTQDAVRRALLVGWCIELLQAFFLVADDIMDASVTRRG
QPCWYKRESVGLDAINDSFLLEGSIYRLLRRHCRAQPYYVHLLELFTETSFQTELGQALD
LMTAPPGQIDLNRFTMERYKAIVKYKTAFYSFYLPVAAAMYMAGIDSEEEHNNAKHILLE
MGEFFQIQDDYLDCYGDPAVTGKIGTDIQDNKCGWLVVTALGVMTPEQRAELESCYGRHD
SVEKVKALYNTLQMPTLYHQYEDDSYQRLQKLIARHAQNLPHAVFLNFAKKIYKRNK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacagtagttgcagcaacgggacccaccactcgggggcggcgcagtcagaccca
cagctgtttgaggcccagtttgaggagctggtgatcgagctcacagagcaggacctcaca
gactctgtcctcgctgacgctctcaacagactccgagaggtgttgcattacaacactcct
ggcggaaaaagaaacagaggcctgtctgtgattggctctttgagggagcttgttcctccc
actgagctgacccaggatgctgttcgacgggccctgctggttggctggtgcattgagctg
ctccaggcgttcttcttggtagctgatgacatcatggatgcttcagtgactcggagaggt
cagccctgctggtacaagagggagagtgtgggtctggatgccatcaatgattctttcctc
ctggagggatccatctacagactactgcgcagacactgcagggcacagccctactacgta
cacctattggagctcttcactgagacgtccttccagaccgagctgggccaggcactggac
ctgatgaccgctcctcctggtcaaatagacctcaaccgcttcaccatggagagatataag
gccatagtaaagtacaagactgccttctactccttctacctccctgtggcagcagccatg
tacatggcgggcatcgacagtgaagaggaacacaacaacgccaaacatatcttactggag
atgggagagttcttccagatacaggatgactacctggattgctatggcgacccggcggtg
acagggaagattggaacagacatccaggacaacaaatgcggctggctggtggtgaccgct
ctaggggtcatgaccccggaacaaagggcagagctggagtcatgttatggtcggcatgac
agtgtggagaaggtgaaagcactgtacaacaccctacagatgcccaccctgtaccaccaa
tacgaagacgacagctatcagcgcttacagaaactcatcgcgcgccacgcccaaaacctt
ccacacgcagttttcctcaactttgccaagaaaatctacaagagaaacaagtga
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