Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388330
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Entry
139388330 CDS
T10872
Name
(RefSeq) LIM/homeobox protein Lhx3-like isoform X1
KO
K09374
LIM homeobox protein 3/4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139388330
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
139388330
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Furin-like_2
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
139388330
NCBI-ProteinID:
XP_070991039
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Position
29:22882471..22895757
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AA seq
397 aa
AA seq
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MLLEHPGSSCQNPGNFSRYSAEIPVCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQL
ADKCFSREDRVYCKEDFFKRFGTKCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQL
ATGDEYYLMEDSRLVCKADYETAKQREADSTAKRPRTTITAKQLETLKNAYNNSPKPARH
VREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRQRWGQYFRNMKRSRGSSKSDKDSI
QEEGMDSDAEVSFTDEPPMSELSHSNGIYSGLSESSLAMGGRQESSHGPFPLEHGVLQSQ
DQYHNIRSSSPYGLPQSPGSLQSLPRHQPPISSLVYPDSGLSIMTQGGAPGLNPGMRGVL
GGANGPSSDLSTGSSGGYPDFPASPASWLDEVDHGQF
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgttgctagaacatcctggatcgagttgtcaaaatcccgggaatttctcccgatacagc
gcagagattcctgtatgcgcgggctgtaatcaacacatcgtggaccgcttcatcctcaaa
gtgctggaccgccattggcacagcaagtgcctgaaatgcagcgactgccaatcccaacta
gcggacaagtgcttcagccgggaagatagagtctactgcaaagaagacttttttaagaga
tttgggaccaaatgtgccgcgtgtcagcaaggtattccgccgacgcaagtggtgaggaga
gcgcaggatttcgtgtaccacctgcactgcttcgcgtgcatcgtgtgcaaaaggcagctc
gcgacaggtgacgagtactacttgatggaggacagcagactcgtgtgcaaggctgactac
gaaaccgccaaacagagagaggcagactcaacagcgaaaaggccacgaacgactatcacc
gccaaacagctcgagaccctgaaaaacgcttacaacaactctccaaaacctgcccgccac
gtacgagaacagctatcgtcagaaaccggcctagatatgcgggttgttcaggtgtggttt
cagaacaggcgagcaaaagagaagaggctgaagaaggatgcaggcagacagaggtgggga
cagtacttccgcaacatgaagaggtcgcgaggcagttcaaaatcagacaaggacagcatc
caggaggagggcatggacagcgacgctgaggtttcctttacagatgagccacccatgtcg
gagctcagccactccaacggcatctacagtggcctgagcgagtcgtccctggccatgggg
ggccgccaggagagcagccacggccccttccccctagagcatggagtcctccagtcccag
gaccagtaccacaacatccgctccagcagcccttacggcctaccccagtccccaggctcg
cttcagtccctgcccaggcaccagccccccatctccagcctggtctaccctgactctggc
ctgtccatcatgacccaaggcggggcccccgggctgaacccaggcatgagaggagtgttg
ggtggcgctaacggccccagctccgatctgtctactggcagcagtgggggctacccagac
ttcccagcgagcccagcttcctggttggatgaagtggaccacggccagttttga
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