Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388346
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Entry
139388346 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115-like isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139388346
04121 Ubiquitin system [BR:
ocla04121
]
139388346
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139388346
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
139388346
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139388346
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4
Zn_ribbon_19
zf-Nse
zf-RING_5
zf-ANAPC11
FAR1_N
zf-C3HC4_3
DUF8608
C1_2
HypA
Motif
Other DBs
NCBI-GeneID:
139388346
NCBI-ProteinID:
XP_070991065
LinkDB
All DBs
Position
3:complement(13769142..13777307)
Genome browser
AA seq
325 aa
AA seq
DB search
MAEAAAVPPHRFFCHCCKGEVSPKLPEYICPRCESGFIEEVTEDSSLLEGGTNGTDDTAT
QFAEQLWHLLFVERPFTVDGDSPDSEPRVPGGGVGVGSGGLGLGGLGGLGGLGGGPIGGS
VPAGLGGPLGGPLGGGEHWGPGRPPRLHSQRRYRSRGSSRPDRSPAVEGIVQQFLAGLFA
NSGVPGSPPLSWTGMLHSNPGDYAWGQGGLDAVITQLLGQFENTGPPPAEKEKISSIPTV
NVSQDQADCSMECPVCKEDFAVGEPVRQLPCNHFFHSDCIVPWLEMHDTCPVCRKGLNGE
DSNTQNPPESPSLNTDPRTQERWSF
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctgcggcggttcccccgcatcggttcttctgtcattgttgtaagggagaa
gtaagccccaagctcccggagtacatctgtcccaggtgtgagtctggctttatagaggag
gtaacagaagattccagtctgctagagggtggcactaacgggacagatgacacagccaca
cagtttgcagagcagctgtggcacctgttgtttgtagagaggcctttcacagtggatggt
gacagtccagactcagagccccgggtccctggtggaggggttggggtaggatcagggggg
ttaggtctggggggtctgggagggctaggaggcctgggaggaggtcctatcggagggtca
gtccctgctgggctaggaggacccctggggggtcctctgggagggggggaacactggggg
cccggtcgcccccctcgtctgcacagtcagcggaggtaccgctccagagggagcagcaga
cctgaccgctcacctgccgtagaggggatagtacaacagtttctggctggtctatttgcc
aactctggagttcctggctcacctcccctctcttggacggggatgctacactctaaccca
ggggactatgcttggggacaggggggactggacgcagtcatcacacagttgttaggtcag
tttgagaacacgggccctcctcctgcagagaaagagaagatctcctccatacctacagtc
aacgtgtctcaggatcaagcagactgcagtatggagtgtccggtgtgcaaggaggacttt
gcagtgggagagcccgtcagacagctaccctgcaaccacttcttccactcagactgtata
gtaccctggctggaaatgcatgatacgtgtcctgtgtgtaggaaggggttgaatggagaa
gacagcaacacccagaaccccccagaatccccctctctaaatacggacccccgcacacag
gagagatggtccttctga
DBGET
integrated database retrieval system
