KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388408
Entry
139388408         CDS       T10872                                 
Name
(RefSeq) RING finger protein 122-like
  KO
K15699  RING finger protein 122
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocla04121]
    139388408
Ubiquitin system [BR:ocla04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    139388408
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4 zf-RING_UBOX zf-rbx1 zf-C3HC4_2 zf-RING_5 zf-ANAPC11 zf-C3HC4_3 VPS18_RING_C zf_RING_Vps8 zf-RING_16 Vanin_C zf-RING_Vps41 Endonuclease_7 U-box_ZFPL1 LapA_dom RING_XB3-XBAT31 zinc_ribbon_16 zf_RING_Vps8_fungal
Other DBs
NCBI-GeneID: 139388408
NCBI-ProteinID: XP_070991153
LinkDB
Position
29:complement(5426506..5450435)
AA seq 131 aa
MSAVAFQDLPLNIYMVIFGTGVFVFVLSLIFCCYFISKLRHQARRESFGYKAVVFKGDTK
KLNLQGQTCAVCLEDFRVKDELGVLPCQHAFHQSCLVKWLEVRCVCPMCNKTITGPPEHH
HSLGTLLDELV
NT seq 396 nt   +upstreamnt  +downstreamnt
atgtctgccgtggcgttccaggaccttcctcttaacatctacatggtcatcttcgggacc
ggagtcttcgttttcgtcctcagtctcatcttctgctgctacttcatcagtaaactaagg
caccaggctcggcgagagagctttggatacaaagcggtggtattcaaaggggatacaaag
aaactgaatctacaagggcagacatgtgcagtgtgcttggaggacttcagagtgaaagat
gagctaggagtgttgccatgccaacatgcctttcaccagagttgcctggtgaagtggctg
gaggtgcgctgtgtgtgtcccatgtgtaacaaaaccatcactggaccaccggaacatcac
catagcctgggcacactactggatgaactggtgtag

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