Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388409
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Entry
139388409 CDS
T10872
Name
(RefSeq) claudin-4-like
KO
K06087
claudin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03272
Virion - Hepatitis viruses
ocla04382
Cornified envelope formation
ocla04514
Cell adhesion molecule (CAM) interaction
ocla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
139388409
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
139388409
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
139388409
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139388409
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139388409
04147 Exosome [BR:
ocla04147
]
139388409
Cilium and associated proteins [BR:
ocla03037
]
Other cilia and associated proteins
Stereociliary proteins
139388409
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
139388409
Exosomal proteins of colorectal cancer cells
139388409
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF1129
Clc-like
Motif
Other DBs
NCBI-GeneID:
139388409
NCBI-ProteinID:
XP_070991154
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All DBs
Position
29:8683879..8685586
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AA seq
215 aa
AA seq
DB search
MLSACLEVLGMGLCLLGSLLVMVACGLPMWKVTAFIDMNIVVAQTIWDGLWMSCVVQSTG
QMQCKMHDSMLALSQDLQTARALTVISAVLGVAGLVVTIAGAQCTNCIKTESVKAKVVNA
GGVVYIISGLLVLVPLCWMANNIIVDFYNPDVSSSKKREIGAAIYIGWAATALLLLGGTL
LCCSCPQGAKSAYPIKYAPTKTISANGDFDKKHYV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgctctctgcgtgtctggaggtccttgggatggggttgtgcctactgggctcgctcctg
gtcatggtcgcgtgcgggctgcccatgtggaaggtgacggcgttcatcgatatgaatatc
gtggttgcgcagaccatctgggacgggctctggatgtcatgcgtggtgcagagcacgggt
cagatgcagtgcaaaatgcacgactcaatgcttgcgctcagccaggacctgcagacggca
cgcgccctcacggtgatatcggcggtgctgggggtggcggggctggtggtgaccatcgct
ggagcacagtgcaccaactgcatcaagaccgaatcggtgaaagccaaagtggtgaacgca
ggcggggtggtctacatcatcagcggtctattggtgctggttcctctctgttggatggcc
aataacatcatagtagacttctacaacccagatgtgtcctcgtccaagaagagggagata
ggagcggccatctacattggctgggcggccacagccctgctccttctggggggaaccctg
ctgtgctgctcctgtccccagggagccaagagcgcctaccccatcaaatatgcccccacc
aagaccatctcggccaatggagacttcgacaagaaacattatgtgtag
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