Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388412
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Entry
139388412 CDS
T10872
Name
(RefSeq) POU domain, class 5, transcription factor 1-like
KO
K09367
POU domain transcription factor, class 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139388412
03021 Transcription machinery [BR:
ocla03021
]
139388412
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
139388412
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
139388412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Stevor
Motif
Other DBs
NCBI-GeneID:
139388412
NCBI-ProteinID:
XP_070991158
LinkDB
All DBs
Position
29:16473042..16475294
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AA seq
471 aa
AA seq
DB search
MSERPQSPTSECNSRPDDFSRAMYAQALSQEGFGGASLQIPHGVLQHSLLFNKAAYNGMP
PTTNQTFLPFPPGTGDYRASDLQAGDFCQPKHWCPIAAPEYTGQVAGVAAATHPTNPSPH
NTDTREQVKMSEIKLEKDVNDEYGQKIQHYPTPPSSAVAHGVYYSTPWNSSFWPGFPHIT
AANTTTQNLNSIPSTSSSSSPSLSPSPPSNGLPGVTFFNGNASQTAQAPQAQTSTRSSGS
SSGGCSDSEEEENLSTEELEQFAKELKHKRITLGFTQADVGLALGNLYGKMFSQTTICRF
EALQLSFKNMCKLKPLLRRWLNEAETSDNPQDMYKIERVFVDTRKRKRRTSLEGSVRTAL
ESYFVKCPKPNTQEITHIADDLCLERDVVRVWFCNRRQKGKRLALPFDEECEGQYYEQSP
PPPHMAHSPLPGQGYSFSGHPGGPTFYMPPLQRPDVFKQALHPGLVGHLTS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagcgaccccagagccctacttcggagtgcaacagccggcctgatgacttcagc
cgggccatgtacgcccaggccttgagtcaagaggggtttggaggcgcgtcgctccagatc
ccacacggcgttctacaacacagtcttctcttcaacaaggccgcatataatgggatgcct
ccaacaaccaatcaaacctttttgccattcccaccgggcactggtgactatagggcctcc
gacttacaagccggtgacttttgccaacccaaacactggtgtcccatcgccgctccggag
tacaccgggcaagtagcaggggtcgcagcggctacccaccccacaaacccgagcccacat
aacaccgacaccagggaacaagtcaagatgtccgaaataaagcttgagaaggatgtcaat
gacgagtatgggcagaagattcaacattatccaactccaccttcgtctgctgtagctcac
ggggtttactactcgactccatggaactcatcgttttggcccggctttccccacatcacg
gctgcgaataccactactcaaaacctcaactccataccctcaacatcgtcttcatcgtcc
ccatctctctcgccctcaccccccagtaatgggttacccggggtcacgtttttcaacggg
aacgcaagccaaactgcccaagcgccccaggcgcaaacctctacccggagcagtggttcc
tccagcggcgggtgcagtgactcggaggaagaggagaacctttcaactgaggagctggag
cagtttgccaaggagctgaaacacaagcgtataactctgggtttcacacaagcagatgta
ggcctggccctaggcaacctttatggcaagatgttcagccagactacaatttgccgcttt
gaagcgctccagcttagcttcaagaacatgtgcaagctgaagcccctgctccggagatgg
ctgaatgaggctgagacctcggacaacccccaggatatgtacaagattgagcgtgtattt
gtggacaccaggaagaggaagcggaggaccagtctggaggggtcggtgcgcactgctctg
gagtcctactttgtcaagtgtcccaaaccgaacacccaggagatcacacacattgctgat
gacctgtgtctggagagagatgtggtacgtgtgtggttctgtaaccgcagacagaaaggc
aagcgcctggccctccccttcgatgaggagtgtgaaggacagtactatgagcagagcccc
cctcccccgcacatggctcactcccccctccccgggcaggggtactctttctctggccac
cccgggggccccaccttctacatgccccccctccagaggccagatgtctttaagcaggcc
ctgcaccctggactggtgggtcacctgacaagctaa
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