Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388448
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Entry
139388448 CDS
T10872
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4-like isoform X1
KO
K23369
ADAMTS-like protein 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139388448
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
139388448
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
TSP1_spondin
TSP1_CCN
PLAC
ADAMTS_CR_3
Motif
Other DBs
NCBI-GeneID:
139388448
NCBI-ProteinID:
XP_070991213
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All DBs
Position
3:complement(14037708..14133654)
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AA seq
1240 aa
AA seq
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MRLRFLYRIYVLWGFVAVTSSLTKAEKKKATGRRSRQVDNSPEGVWSAWEEWSGCSQSCG
VGVSQRTRKCEAPPRSLTPPLSHSLPNWGGSSFLPGRAGGPNHGSVISAIRPFYSPHYSR
NQPSQYGGGGGGGTERQPDTFYPPSLPSSNQNPGLSLYRDTPIGGGAGAVPAQSSNPTSP
LYRPEFSSPNQGPGSVYRSPSFPAPPSSYSQPAHAARQPANPGTGRVGGSGSRRSVLPNR
GALPASRSSSIRPGQFGYGRVPFSLPLHRQNRQARHTEHGNATITTLVLETEGQEGTIVN
IDQMDRPGEGEEKRRGEKEREGGNNHEGNRGEREHERREEERKTEGESTESPVAKALLTT
TIAKPERNGQRDTDTHRQTDRPRQAAAERGRERGRERERVPSTLPHSHRPSPFQPNHDRI
IDRRAHPPLPPLPHSYPPPLSHPYSPPLHRSSHEHRERDEFNPQLQSPHPRPPQPNIYPL
QQQQHPHPLAEGETGGQRLPPQNYRCSGAENEYRRCFSQVCVGGADSRAEQCASYNNQEF
MGRLYDWEPFTQVGVEKQCELTCRPVGYRFYVSQADRVRDGTPCVNTSTNDVCVAGRCLT
EGCDGVLGSGLVIDRCGQCGGRDLSCQKLSGSFQNTSVPLGYHRILDIPPGATAINITER
HASSNYLALRSGTGVSVVNGRWAVDPPGDYEAGGTTFTYTRPRALSDGQEDRGETLRAPG
PTTTQLTLYIIFHRQNPGIDYEFYIPTEKKVEERERPRERERERPREREVERERPRAPLR
DTSSLIVTVEDPIPPPPISSSSSSFSSSSSADRWTAESSRTRGSVPNRNVRIPPRTDLPL
DTQSPFVWRRGGLTECTASCGKGSQYRVILCINRHTDEEVPDRKCDSAARPSPEEEPCNT
HPCPAFFEASSWSECSVSCGMGVQQRQLQCRQSFGNRSTMVQPQRCSNLTPPDLTQSCQL
RLCSHWEIGTDWSSCSVDCGMGKRTRNVRCVSNHGSVVNDKECNARLRPQGSEDCHMGPC
VTNWYFTGWSNTCSALCGPGVQRRKVLCLTRGGREGGECLGDKPADMKACNGGPCAPTYM
WYSSPWGQCSAPCGNGTQRRDIICVEKMGTDFKVAPISQCAQLEKPPSVQTCAMEACQPQ
WFTTEWSACSRSCGKGLQIREVRCLTPDKQHSPECSLTDKPDQEQLCNTIPCSPQVADEN
CRDLRHNCVMVVQARLCVYSYYKTACCASCTQSAQRAKRH
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcaggtttctgtacaggatttatgtgctgtggggttttgtggcagtcacatcc
tctctgaccaaggctgagaagaaaaaggcgacgggcagaagatctcggcaggtggacaat
agtccggagggggtgtggtctgcctgggaggagtggtcaggatgttctcagagctgtgga
gtgggcgtgtcacagagaaccagaaagtgtgaagcccctccccgttctctaactcctccc
ctctcccactctcttccaaactgggggggttcatcgttcctcccagggagggccgggggt
cccaaccatggctctgtcatctccgccatccgccccttctactcccctcattactctagg
aaccagccatcccagtacgggggaggaggtgggggagggacagagagacagccagacacc
ttctatcccccctcactcccatcatccaatcagaacccaggactgtctctctatcgggac
actcctataggaggaggggcaggagctgtgccagcgcagtcctccaatcccacgtctccc
ctctatcgcccggaattctcatcacccaatcagggaccaggttctgtttaccgttccccc
tcatttcctgcccccccatccagctacagccaaccagcacatgccgcccgccagccagcc
aatcctggaacagggagggtgggaggaagtgggagcagaaggtcagtgttgcccaatagg
ggggctctgcctgctagtaggtcctcttctatccgtccgggtcagtttggttacggcagg
gttcccttctctctgccattacaccggcaaaaccggcaggcccgccacactgagcacggc
aatgctaccataacaaccctggtactagagaccgaggggcaggagggaactattgttaac
attgaccaaatggacagacccggagaaggagaagagaagaggaggggagagaaggagagg
gagggaggcaataaccacgaagggaataggggagagagggagcatgagaggagagaggag
gagaggaagacagagggggagagtacggagtcacctgttgctaaggcattgctaacaaca
accatagctaaaccagaaaggaatggacagagggacacggacactcacagacagacagac
agaccaagacaagctgctgcggagcgagggagggagagagggagagaaagagagcgagtg
ccgtcgaccctccctcactcacacaggccatctcccttccagcccaaccacgacagaatc
attgatagacgcgcccatcctcccctcccccctctgcctcactcctaccccccccctctc
tctcacccctactcaccccctctccaccgctcctcccacgagcacagagagagagatgag
ttcaaccctcagctccaatcccctcaccctagacccccccaacccaacatctaccccctg
caacaacagcagcacccccaccccctggccgagggggagacagggggacagagattaccc
ccccagaactacaggtgttcgggagcagagaatgagtatcgtcggtgcttctcacaggta
tgtgtaggaggtgcagactccagagcagagcagtgcgcttcctacaacaaccaggagttt
atgggcagactgtacgactgggaacctttcactcaggttggggtggaaaagcagtgtgag
ctgacgtgtaggccggttggatatcgcttctacgtgagtcaggcagacagagtgagagat
ggaacaccctgcgttaacaccagcaccaatgacgtgtgtgtggccgggcgctgcctgact
gagggctgtgatggggtgttggggtctggcttggtgattgacaggtgtggtcagtgtggg
gggcgggacctgtcctgtcagaagctgagcgggagcttccagaacaccagtgttcccctt
ggttaccacagaattctggacatccccccaggagctactgccatcaacatcacagagaga
cacgccagctccaactacctggccctacgtagtggtacaggtgtatcagtagtgaatggg
cgctgggcggtggatcctccaggagactacgaggcaggggggactaccttcacctacacc
cgccccagggctctctctgatgggcaggaggacagaggagagacccttagagctccagga
cccaccaccacacaactgactctatatatcatcttccataggcagaatccagggatcgac
tatgaattctacatcccaacagaaaagaaagtggaagagagggagaggccgcgagagaga
gaaagagagaggcctagagagagagaagtagagcgggaacgaccgagggcacccctgaga
gacactagttctctcattgtaacagtggaagaccctatccctcctccccccatctcctct
tcgtcctcttccttctcctcctcttcttccgcagacagatggacagctgagagctcccgc
acccgaggctcggtacccaatcggaatgttcgaatcccacctcgtactgacctgcccctc
gacacccagtcacccttcgtatggaggaggggcgggctcactgagtgtactgcttcctgt
ggcaaagggtcccagtacagggtgatcctgtgtattaaccgccatactgacgaggaagtc
ccagacaggaagtgtgactcagcagcaagaccctcccctgaagaggagccctgcaacaca
cacccctgcccagcattcttcgaggccagctcatggtcagagtgcagtgtgtcttgtggt
atgggagtacagcagagacagcttcagtgcagacagagctttgggaaccgttccaccatg
gttcaaccacaacgctgctccaacctaaccccacctgacctcacccagtcctgccagcta
cgactctgctcacactgggagataggcaccgactggagctcttgctcagtggactgtggc
atggggaagagaactcgtaatgtccgctgtgtcagtaaccatggcagcgtggtgaatgac
aaggagtgtaacgccaggctccgcccacaaggaagtgaggactgtcacatggggccctgt
gtaaccaactggtacttcactggctggtccaacacttgttcagctctgtgtggtccaggt
gttcagaggagaaaggtgttgtgtctgacccgtggagggagagagggaggagagtgtttg
ggggacaaaccggcggacatgaaggcgtgtaacgggggtccgtgtgctcccacctacatg
tggtacagtagcccctggggtcagtgtagtgctccatgtgggaatggaactcagcgaagg
gacatcatctgtgtggagaagatggggacagatttcaaagtggcaccgatcagccagtgt
gcccagctggaaaagcctccctcggtgcagacgtgtgcgatggaagcatgtcagcctcag
tggtttactacggagtggagcgcgtgctctcgttcctgtggtaaggggctacagatcaga
gaagtacggtgtctcacacctgacaaacagcacagcccagaatgctcccttacagacaaa
cctgaccaggagcagctctgcaataccataccctgcagtccacaggtcgcagatgagaac
tgcagggacctgcgtcataactgtgtgatggtggttcaggccagactgtgtgtctactcc
tactacaagactgcctgctgcgcctcatgtacccagagtgctcagcgggccaaaaggcac
tga
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