Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388460
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Entry
139388460 CDS
T10872
Name
(RefSeq) vascular endothelial growth factor C-like
KO
K05449
vascular endothelial growth factor C/D
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04020
Calcium signaling pathway
ocla04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139388460
04020 Calcium signaling pathway
139388460
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139388460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139388460
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Growth factors (RTK binding)
139388460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
CXCXC
Motif
Other DBs
NCBI-GeneID:
139388460
NCBI-ProteinID:
XP_070991227
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All DBs
Position
29:35677494..35694328
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AA seq
397 aa
AA seq
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MWMLSLAVWILNVTNLTHGYDYDEYYPGEEETKAPLVGEGLSDLDTVSNVDELVELFYPE
YSLVQHCLRRKTQRTSTPLHAEDDVWAWGKPREGALYKSDDGTFDVILEEIQRTMCSPRE
VCLEVSKEYPESTRHFYMPRCVSVHRCGGCCNHEGLYCTNTSHTYSNKTLLEMTHREHSV
VMVAFVNHTSCECLSKRPQHSVIRRAAAAHLTVCSPPDVPCSTGLVWDPTSCLCVPMDTS
FFSERELEPLESALLALCGPNKILDEDSCECVCENGLTEASCGPGWRLDQASCECLCEDQ
PAPGTCPPNQRWDPELCGCVCRAECPRSQPLNPETCLCQCRDSPQTCLLEGKRFNAHNCS
CYRLPCRKPHNSCPTGFYYSHYVCQCIPNHMRSGEWN
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtggatgttatctttagccgtatggattctcaatgtcacaaatctcactcatggatat
gactatgatgagtattacccaggcgaggaggaaaccaaggccccgctggttggggaggga
ctcagtgatttagacacagtgtctaatgtggacgagctggtggagctgttctacccagag
tacagtctggtgcagcattgcctacgtaggaaaacccagcgcacctccactcctctccat
gctgaagacgacgtctgggcctggggcaagcccagggagggggcactgtacaagtctgac
gacggcacctttgacgttattctggaggagatccagcgtaccatgtgcagtcctcgggag
gtgtgtctggaggtgtctaaagagtacccagagagcacccgtcacttctacatgcctcgc
tgtgtgtctgtgcaccgctgtgggggctgctgtaaccacgagggtctgtactgcaccaac
accagccatacttacagcaacaagacgctgctggagatgactcaccgtgaacactctgtg
gtgatggtggcgttcgtcaaccacacatcctgtgagtgtctgtccaagaggccccagcac
tctgtcatcaggagggctgctgcagcccacctcaccgtgtgttctccgccagatgttccc
tgcagtacaggactggtctgggaccccaccagctgcctgtgtgttcccatggacacaagc
ttcttctccgagagagagctggaacccctggagtcggccttgctggcgctgtgtggcccc
aacaaaatcctggacgaggacagctgtgagtgtgtgtgtgagaacggtctgacagaggcc
agctgtgggccgggctggcgtctagaccaggcgtcctgtgagtgtctctgtgaggaccag
cccgccccggggacctgccctcccaaccaacgctgggacccagagctgtgtggctgtgtg
tgccgggcagagtgcccccgtagccagcctctcaacccagagacgtgcctgtgccagtgc
agggatagccctcagacctgcctgctagagggcaagaggttcaacgcacacaactgcagc
tgttaccggctgccctgcagaaagccacacaacagctgtccaacaggcttctactacagc
cactacgtctgccagtgcatacccaaccacatgaggtcaggggagtggaactga
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