Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388486
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Entry
139388486 CDS
T10872
Name
(RefSeq) C-X-C motif chemokine 10-like
KO
K12671
C-X-C motif chemokine 10
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04060
Cytokine-cytokine receptor interaction
ocla04620
Toll-like receptor signaling pathway
ocla04622
RIG-I-like receptor signaling pathway
ocla04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139388486
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
139388486
04622 RIG-I-like receptor signaling pathway
139388486
04623 Cytosolic DNA-sensing pathway
139388486
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ocla04052
]
139388486
00536 Glycosaminoglycan binding proteins [BR:
ocla00536
]
139388486
Cytokines and neuropeptides [BR:
ocla04052
]
Cytokines
Chemokines
139388486
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Heparan sulfate / Heparin
Chemokines
139388486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
139388486
NCBI-ProteinID:
XP_070991279
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All DBs
Position
29:4815660..4817001
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AA seq
109 aa
AA seq
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MRTATLILFCVTVFGAGLAQSPGGRSEKYLCRGKLMQSVRIKRIQKLEVYPNTVFCAKTE
IIATMKNGKKKCLNPEGKLGKRFLMRKRLEVQQKRKGGLGRKNKNNSNP
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgaggacagcaactttgatcctgttttgtgtcacagtcttcggagctggacttgctcaa
tcccctggtggaagatctgagaaatatctatgcagggggaaactaatgcagtctgtgagg
ataaaacgcatccagaagttagaggtgtacccaaatactgtcttctgtgcaaagacagaa
attattgccacaatgaagaatggtaagaaaaagtgtctgaacccagagggcaaactagga
aaaagattcctgatgagaaaaagactggaggtgcaacagaagcgaaaaggaggactggga
aggaagaacaaaaataattctaatccctga
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