KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388517
Entry
139388517         CDS       T10872                                 
Name
(RefSeq) transcription elongation factor SPT6
  KO
K11292  transcription elongation factor SPT6
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Transcription machinery [BR:ocla03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     139388517
Chromosome and associated proteins [BR:ocla03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     139388517
SSDB
Other DBs
NCBI-GeneID: 139388517
NCBI-ProteinID: XP_070991316
LinkDB
Position
29:37126272..37176924
AA seq 1749 aa
MSDFIDSEAEESEEEFEEKDLKPKKTQAFMDDEEEEEELNTEDQDEHGNLMGLIDDDVDE
DEEEEEKKSGGAGSGSDSEDEVRHRRKKRNYDDYLDDDDLDLIEENLGVKVKRRKKKYDR
VKTMDDDEDDEKDQIADEIFHRGDDEDGEGELEEGETVDPPLRRHGERLDEEEEEEGEEE
SDIDDFIVDDDGQPITKRRSKKFAGYTDAALQEAQEIFGGDFDFAEFDADGAYEQGEEEE
EDQDEEGWDRPKKPTKRRVGRKSIFELYEPSELESSHMTDQDNEIRSTDMPERFQLRSIP
VKPAEDDELEEEAEWIYRNAFSTPTISMQESTDYLDRGATTNFSRKGPSTIAKIKEALNF
MRNQHFEVPFIAFYRKEYVEPELNINDLWKVWQWDEKWCQLKSRKQNLTRLFRRMQGYQY
EQISADPDKPLADGIRPLDTADMERLKDVQSIDELSDVYSHFLLYYGRDIPKMQNAAKAA
SKKKKKKKKIEVNEEGEEEEVEEEEEVEEEKGPDLKLASRRDMYSICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPVELAKDYVCSQFNSPEVVLEGTRYMVAMQIAREP
LVRHVLRQTFQERAKINIKPTKKGKKDMDEAHFGYSFKYLKNKPVKELNGDQFLKMCQAE
EEGLLTIDICIDLLGVKGVAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERSLTQF
LYPQMAKELKNKLIAEAKENIIKSCCRRLYNWLKVAPYRPDQQAEEEDDDLMDESQGKGI
RVLGVAFADSRDTPVFCSLINGEGEVVDFLRLPYFLKRRNAWKEDERDKKLQDIENLKKF
LTSKKPHVVAVAGENRDAHMIMEDIKRTVSELEQESSLPAVGVELVDNELAMLYMNSTKS
QTEFRDYPPLLRQAVSVARKIQDPLVEYAQVCSSDEDILCLKLHPLQEHVVKEDLLSALY
CEFINRVNEVGVDVNRAISHPYTQSLVQFVCGLGLRKGSHLLKILKQNNTRLENRTQLVT
MCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDES
AEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRV
PYRAPNTEEVFNLLTKETPETFYIGKLITSVVTGIAHRRPQGESYDQAIRNDATGLWQCP
FCQQDNFPELSEVWNHFDSGSCPGQAIGVRARMDNGVQGFIPTKFLSDKVVKHPEERVKV
GMTVHCRIMKIDIEKFNVDLTCRTSDLMDKNNEWKLPKDSYYDFDTETEDTKTEEERKKK
QQRTTYIKRVIAHPSFHNINFKQAEKMMESMDQGDVVIRPSSKGENHLTVTWKVADGIYQ
HVDVREEGKENAFSLGHTLWINTEEFEDLDEITARYIQPMAAFARDLLGHKYFQDCNGGD
RKKMEELLIRSKKEKPTFIPYFVSACKDLPGKFILGYQPRGKPRVEYVTISPDGFRYRSQ
MFPTVNGLFRWFKDHFQEPVPGITPSSSSRTRTPASVNATPANINIADLTRAVSALPRNM
TSQMFSAIAAVTGQGQGQNANTTPAQWNSSQYGYTGGSSGGGGGSSSAYHVFATPQQPMA
TPMMTPSYSYTTPSQQTMGTPQYPSTPQSSHSHGHTQSNQGHSSHQGPSSNTPSSSSRGR
TPQQQPKSSGSAAVDWGKVAEQWLQEKEAERKKQKTPRMTPRPSPSPMIQSTPMSIAGDA
TPLLDEMDR
NT seq 5250 nt   +upstreamnt  +downstreamnt
atgtctgacttcatcgatagcgaggctgaggagtcggaggaggagtttgaagagaaagac
ctgaagcctaaaaagacccaggcgtttatggatgatgaggaagaggaggaagagttaaac
acagaggaccaggatgagcacgggaacctgatggggctcatcgacgatgatgtggatgaa
gatgaggaagaggaagagaagaaaagcggaggagcaggcagcggcagcgactcagaggat
gaagtcagacacagacgcaagaaacgcaactatgacgactacctggatgatgatgatctg
gacctcattgaggagaacttgggagtcaaagtcaagaggaggaagaagaagtatgaccgt
gtgaagactatggatgatgatgaagatgatgagaaggaccagattgcagacgagatcttc
cacagaggagatgacgaggacggagagggggagctggaggagggagagacagtcgacccg
cccctacgtcgccatggtgaacgcctcgatgaagaagaggaagaggagggagaggaggag
tcggatattgatgactttatcgtggacgacgatggccagcctatcaccaagaggagaagc
aagaagttcgcaggatacacggatgcagccctccaggaagctcaggagatcttcgggggc
gacttcgactttgcggagttcgatgccgacggtgcttatgaacagggtgaggaagaggag
gaggaccaggatgaagagggctgggaccggcccaagaagccaacgaagaggagggtgggg
aggaagagcatcttcgagctctacgagcccagcgagctggagagtagtcacatgactgac
caggacaacgagatccgctccacagacatgccagagaggttccagctgcgctccatccca
gtgaagcctgctgaggacgatgagttggaggaagaggcagagtggatctacagaaacgct
ttctcaacccccaccatctccatgcaggagagtacagattacctggacagaggagccacc
actaactttagcaggaagggccccagcaccatcgccaagattaaggaggccctcaacttc
atgaggaatcagcattttgaggttccattcatcgcgttctacaggaaggagtacgtagaa
ccggagctcaacatcaacgacctgtggaaggtctggcagtgggacgaaaagtggtgccag
ctgaagagcaggaagcaaaacctgacacgtttgttccggaggatgcaggggtaccagtat
gagcagatctctgccgaccccgacaagcccctggctgacggcatcaggcccctggacact
gctgatatggagagactgaaagatgtccagtccatagatgagctgagtgacgtgtatagt
cacttccttctgtactatggccgagacatccccaagatgcagaacgcagccaaagctgcc
agcaagaagaagaagaagaagaagaagattgaggtcaacgaggaaggtgaggaggaagag
gtggaggaagaggaggaggtggaggaagagaaggggccggacctgaagctggcatctcgt
agagacatgtacagcatctgtcagagcgctgggctcgatggcctggctaagaagtttggt
ctgactccagagcagtttggagagaatctgagagacagctaccagcgtcacgagacagag
cagttccctgccgagcctgtggagttggctaaagactacgtctgcagccagtttaacagc
cctgaggtggtgttggaggggacccgttatatggttgcgatgcagattgccagggagcct
ctggtcagacacgtcctcagacagacgttccaggagagagccaagatcaacatcaagccc
accaagaagggaaagaaggacatggacgaggcccactttggctactccttcaagtacctg
aagaacaagccagtgaaggaactgaacggagaccagttcttaaagatgtgccaggctgag
gaggaggggcttctcaccatagacatctgcatcgatctcctaggggtcaaaggggttgca
ggtgaccagacatactttgatgagatcaaacagttttactacagagatgagttcagtcac
caggtgcaggagtggaacaggcagaggaccctggccatcgaacgctccctcacacagttc
ctctaccctcagatggccaaggaactcaagaacaaactcatcgcggaggccaaggaaaac
atcatcaagtcatgttgcaggaggttgtataactggctgaaggtggctccttacagacca
gaccagcaggcggaggaggaggatgatgatctgatggatgagagtcaaggaaaaggcatc
agagtcctgggagtggccttcgcagacagcagagacacgccagtgttctgttcactgatc
aacggagagggagaggtggtggacttcctccgtctgccctacttcctgaagaggaggaac
gcatggaaggaggacgagagagacaaaaagctccaggacattgagaacctgaagaagttc
ctgaccagtaagaagcctcacgtggtggctgttgccggggagaatagggacgcccacatg
ataatggaggacattaagaggacagtgagtgagttggagcaggagtcttctctgcctgct
gtgggagtggagctggtagacaacgaactggccatgctctatatgaacagtaccaaatct
cagactgaattccgtgactaccctcccctgctgcgccaggctgtgtcagtagccaggaag
attcaggatcctctagtggagtacgctcaggtctgcagctcagacgaagacatcctctgc
ctcaaactacaccctctacaggagcatgtagttaaggaggacctgctgagtgctctgtac
tgtgagtttataaaccgggtcaacgaggttggggtggatgtgaaccgagccatctctcac
ccctacacacagagcctggttcagttcgtctgtggcctcggactcaggaagggatcccac
ctgctcaagatcctgaagcagaacaacactcgtctggagaacaggactcagctggtcact
atgtgtcacatgggccccaaggtcttcatcaactgtgccggcttcatcaagatagacacc
gcctctctcggagacagtactgactcatacatcgaggttctggatgggtcccgggtgcac
ccggagacatatgagtgggccagaaagatggcggtggacgctctggaatacgacgagtca
gcggaggacgccaacccggccggagcgctggaggaaatcctggaaaacccggagcgcctc
aaagatctggacctggatgcttttgctgaggaactggagagacagggttatggtaacaag
ggcatcaccctgtatgatatccgtgctgagttgagctgcaggtataaggacttgagagtt
ccctacagagctcctaacaccgaggaggtgtttaacctgcttaccaaggagacaccagag
accttctatataggtaagctgatcaccagtgttgtgaccggtatagctcaccggcgcccc
cagggggagagttatgaccaggccattaggaacgacgctacagggctgtggcagtgcccc
ttctgtcaacaggacaacttccctgaactcagcgaggtgtggaaccattttgacagtggt
tcgtgtcctggccaggctataggtgtgagggctcggatggacaacggtgtccagggcttc
atccccaccaagttcctcagtgacaaggtggtcaaacaccctgaggagagggtgaaggtg
ggtatgacagtacactgtcgcatcatgaagattgacattgagaagttcaacgtggacctg
acatgtcgtacgtctgacctgatggataaaaacaacgagtggaagctccctaaagacagt
tactacgacttcgacacggagacagaggacaccaagacagaggaagaacgcaagaagaaa
cagcagagaaccacctatataaaacgtgtgattgcccacccatccttccacaacatcaac
ttcaagcaggctgagaagatgatggagtccatggaccagggagatgttgttatcaggccc
agcagcaagggagagaaccaccttactgtcacctggaaggtagctgacggcatctaccag
catgttgatgtgagagaggagggcaaggagaacgccttcagcctgggacacacactctgg
atcaacactgaggagtttgaagatcttgatgagatcacagctcgttatattcagccaatg
gcagcgttcgctcgtgacctgcttggacacaagtacttccaggactgtaacggaggggac
aggaagaaaatggaggagttgttgatcaggtctaagaaggagaagcctacgttcataccc
tactttgtctcagcctgtaaagacctgccagggaagttcatactgggataccagcctcgt
ggcaaaccacgtgttgagtatgtgaccatctctcctgacggcttccggtaccgctcccag
atgttccccaccgttaacggactgttccgctggttcaaagaccacttccaggaaccggta
ccaggcatcacccccagcagtagcagtcgaacacggacacctgcctctgtcaacgctaca
ccagctaacatcaacatcgcagacctgacgcgagcggtcagcgctctcccacgcaacatg
acctctcagatgttcagtgccatcgccgcggtgacggggcaggggcagggccagaacgct
aacactacgcctgcccagtggaactccagccaatacggttacaccgggggaagcagcggg
ggcgggggaggcagctcctcagcctatcacgtgtttgcgacgccccaacagccgatggcg
acacccatgatgacccccagctactcatacaccacccccagccagcagaccatgggtacc
ccgcagtacccctccaccccccagtcctcccactcccatggacacacacagagcaaccag
ggccacagcagccaccagggaccctcgtccaacactccctcgtcctcctccagaggacgc
actccgcagcagcagcctaagtcgagcggcagcgcggcggtggactggggcaaggtggca
gagcagtggctccaggagaaggaggcagagaggaagaagcagaagacccccaggatgacc
ccgcgaccttcccccagccccatgatccagagcacgcctatgtcaatcgctggagacgcc
acgccccttctggacgagatggaccgatag

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