Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139388538
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Entry
139388538 CDS
T10872
Name
(RefSeq) PH and SEC7 domain-containing protein 4-like isoform X1
KO
K12494
PH and SEC7 domain-containing protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139388538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139388538
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
139388538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
139388538
NCBI-ProteinID:
XP_070991351
LinkDB
All DBs
Position
29:19569353..19585407
Genome browser
AA seq
1099 aa
AA seq
DB search
MEGSRVRSPLPDLREQDSQTWPNMDLPLHSRPLEEAIGWREMEEQVNQMDREEEDNSHQT
GRTEEPEEHWDSMTLPVYPMIHPSVPLSFATVQWDITNPSPDIPYPMTDNSSADELDSSG
AASLDWTVSPLSHHHHQQQQQHQACVPGINIELSVQEKTHNHNRPEQQLPLDTDQSESSP
RAWDTPRPYVEEHAAHTQEEEASAQELFEDHDSLSGRRPWPEEGIGQSVTEETITPSDIA
PSSVETGESETRPDSESLGSVPGEKQEQTGTVLTIQINPEQGSSSTDYEEEEEEQTEQIG
QSEGREQSDSEEESAMIELLEHLLEPAELKEQSELSEKSEHSGQSEPNHTEQSEYGNNNE
TTEQPEDSEKLVESDQVEHSNQSGDEDQQTEEAHLQQAEQSEVTDQSKQSKESEQTQQPE
QTECLESKQTQHSEQTMHSEQTDFSVQAEPQTEPSQQTEHSEDSEQSKQSGQMEQSEQTE
QSEQTEQSEQTEQSEQTEQSEQTEQTEQSEQTEQSEQTDKPIHSKQLEELLFLCTEELEQ
TDQTEDQKQSGDEQPAQTALTESTEELEQTEHVEQLEQNVCTEDSCLPPREGSGEQLESQ
VQQTEASEPVVVHMNGGGLDRERACRLAERLYRLDGIYKTDVVKHLDKDNDFSRAVGEEY
LKFFDFTDQRLDQGLRSFLRVVVLIGETQERERVLQHFSCRFQQCNPHTFSSSGEVLTLT
CSVMLLNSDLHGQNVGKPMSVSSFVSNLDGMNEGESFSKELLKALYNSIKNEPLEWAVDE
KELKSSMLLAEDAKEDAPLRSKSNPFQDVPHDKKASVFKQSFLKRKAHADIDGKRTPWGK
RSWKIFYGVLKGMVLYLQKDEYTMEWQSTEEVVSVHHALAEQAADYTKRPHVFRLQTADW
RVFLFQASSTAEMISWISRINLVSALHSSPPFPAAVGSQRKFCRPILPASQSAHTLERQL
QSHAGMLESFQEDLAYLQQSLPDGRRAKAKEMEEHRVREEYLQHEKCRYEAYIQMLEVWK
GLNQSTETEVGTSELNLFDRAVCKDTVDEEGGEGTLKKSHSSPSLDLEMASQPVVKVKRN
ISERRTYRKIIIPRRNQDI
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtctagggtgcgctctcctctcccagacctcagggagcaagacagccagaca
tggcccaatatggatctcccactacatagcaggccactcgaggaggctattgggtggaga
gagatggaggagcaagtgaaccagatggacagggaggaagaggataactctcatcagact
ggaaggactgaggagccagaggagcactgggattccatgactttacctgtgtaccccatg
atccatcccagtgtccctctgtcctttgccacggtgcagtgggacataaccaacccctcc
cctgacattccctaccccatgactgacaacagctcggccgatgagctggactccagtgga
gcggccagtctggactggactgtgagtcccctgtcccaccaccaccaccagcagcagcag
caacatcaagcctgtgtgccaggaatcaacatagagctgtctgtccaggagaagacacat
aatcacaacagaccggagcaacagctgcctttggacacagaccagagtgaaagctcccct
cgggcatgggatacaccaaggccatatgtggaggagcatgcagcacacacacaggaagag
gaggcttcagcacaagagctatttgaggaccatgactctctttcagggagacgtccatgg
ccagaggaagggataggacagtctgtgacagaggagactatcacaccctctgatatagct
cctagctctgtagaaacaggagagtccgagactaggccggatagtgagagtttaggctct
gtgccgggagagaaacaggaacagactggcacagtcctgactatacagatcaacccagag
caaggatccagctctacggactatgaggaggaggaggaggagcagacagaacagatagga
cagtcagaggggagggaacagtcggacagtgaggaggaatcagcaatgatagaactctta
gagcacctgcttgagccagctgaactgaaagaacagtcagaactctcagagaagtctgaa
cacagtgggcagtcagagcctaatcacacagaacagagtgaatacgggaacaataatgag
acaacagagcagccagaagactctgagaaacttgtagagtccgaccaggtagaacattca
aatcagtcaggggacgaagaccagcaaactgaagaggcccatttacaacaggcagaacag
tcagaagtgacagaccagtcaaaacaatcaaaagaatcagagcagacgcaacagccagaa
cagacagaatgtttagaatcaaaacagacgcaacattctgagcaaactatgcactccgag
cagacagacttttcagtgcaggcagaaccacagacagaaccatcacagcagacggaacac
tctgaagattctgagcagtcaaaacaatcagggcagatggagcagtccgagcagacggag
cagtcagagcagacggagcagtcagagcagacggagcagtcagagcagacggagcagtcg
gagcagacggagcagacggagcagtcagagcagacagagcagtccgagcagacagacaaa
ccaatacattcaaagcagttagaagaattacttttcctttgcacagaggagcttgaacag
acagaccagacagaagaccagaaacagtcaggggatgaacagccagcgcagactgcactg
actgagtcgacagaagagcttgagcagacagagcatgtagaacaattggaacagaacgtt
tgtacagaggattcatgtttgccgcccagggaaggaagtggagagcaactggagtctcag
gtacagcagacggaggcctcagaaccagtggtggtccatatgaatggtggaggtttggac
agggagagggcctgcaggctggctgaaagactctacaggctggatgggatctacaagaca
gatgtggtcaaacacctggacaaagataatgactttagccgagccgttggggaggagtac
ctgaagttctttgacttcaccgatcagagactggaccaaggcctgaggtctttcctgagg
gtggtggtgcttatcggtgagacccaggaaagagagcgggtgctgcagcatttctcctgt
cgattccagcaatgcaaccctcacaccttctcctcttccggagaagtactcacactcacc
tgttctgtgatgctcctgaactctgatctgcatggacagaatgtgggcaaacccatgtct
gtgtccagcttcgtgtccaacctggatgggatgaatgagggtgagagcttcagtaaggag
ctgttgaaggctctctacaactccattaagaacgagcctctggaatgggcagttgatgag
aaggaactgaagagctccatgttgttggcagaggatgctaaagaggacgcacccctgcgc
tccaagagcaacccgttccaagatgtgccgcatgacaagaaggcctcagtgttcaaacag
agcttcctcaaacgcaaggcccacgctgacatcgatggcaaacgcactccttgggggaag
agaagctggaagatcttctatggagtgctgaagggaatggtcctctacttgcagaaggat
gagtatacgatggagtggcagagtacagaggaggtggtcagtgtgcaccatgccctggca
gagcaggcagcagactacactaagagaccacacgtcttccgcctgcagaccgctgactgg
agggtcttcctctttcaggcctcctccacagcagagatgatttcatggatcagccgtatc
aacctggtgtcagccctacactcctctcctcccttccctgctgccgtgggctctcagagg
aagttctgcagacccatcctgccagcctcgcagtctgcacacacactggagagacagctg
cagtcccatgcaggcatgctggagtccttccaggaagacctggcctacctgcagcagagt
ctccctgacgggcgcagggccaaagccaaggagatggaggaacaccgagtcagagaggag
tacctgcagcatgagaaatgtcgctacgaggcctacatccagatgctggaggtctggaag
ggtttgaaccagtcaactgagactgaggtgggaaccagtgagctcaacctgtttgacaga
gctgtgtgtaaggacacagtggatgaggaggggggggagggaaccctgaagaagtcccac
tccagcccctccctggatctggagatggcctcgcaacccgtggtcaaagttaaacgcaac
atctcggagagacggacctatcgcaagatcatcataccgagacgcaaccaggacatatga
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